RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 CCDC102AQ96A19 550 aa26.64■■□□□ 1.86
LMBR1-217ENST00000485985 MYH16Q9H6N6 1097 aa26.64■■□□□ 1.86
LMBR1-217ENST00000485985 GGA3Q9NZ52 723 aa26.64■■□□□ 1.86
LMBR1-217ENST00000485985 WTIPA6NIX2 430 aaPredicted RBP26.63■■□□□ 1.85
LMBR1-217ENST00000485985 MLLT1Q03111 559 aaPredicted RBP26.63■■□□□ 1.85
LMBR1-217ENST00000485985 PLA2G12BQ9BX93 195 aa26.63■■□□□ 1.85
LMBR1-217ENST00000485985 ASTN2O75129 1339 aaPredicted RBP26.63■■□□□ 1.85
LMBR1-217ENST00000485985 F6X3S4 739 aa26.62■■□□□ 1.85
LMBR1-217ENST00000485985 ZNF157P51786 506 aaPredicted RBP26.62■■□□□ 1.85
LMBR1-217ENST00000485985 ZNF280AP59817 542 aaPredicted RBP26.62■■□□□ 1.85
LMBR1-217ENST00000485985 KIF23Q02241 960 aaPredicted RBP26.62■■□□□ 1.85
LMBR1-217ENST00000485985 DGKZQ13574 1117 aa26.62■■□□□ 1.85
LMBR1-217ENST00000485985 RSBN1LQ6PCB5 846 aaPredicted RBP26.62■■□□□ 1.85
LMBR1-217ENST00000485985 AGBL3Q8NEM8 1001 aa26.62■■□□□ 1.85
LMBR1-217ENST00000485985 ZNF609O15014 1411 aa26.62■■□□□ 1.85
LMBR1-217ENST00000485985 BSDC1Q9NW68 430 aaPredicted RBP26.61■■□□□ 1.85
LMBR1-217ENST00000485985 MINPP1Q9UNW1 487 aa26.61■■□□□ 1.85
LMBR1-217ENST00000485985 CDCA5Q96FF9 252 aa26.6■■□□□ 1.85
LMBR1-217ENST00000485985 ATP2B4P23634 1241 aa26.59■■□□□ 1.85
LMBR1-217ENST00000485985 SCARF1Q14162 830 aa26.59■■□□□ 1.85
LMBR1-217ENST00000485985 GMLQ99445 158 aa26.59■■□□□ 1.85
LMBR1-217ENST00000485985 SAGE1Q9NXZ1 904 aa26.59■■□□□ 1.85
LMBR1-217ENST00000485985 MED23Q9ULK4 1368 aa26.58■■□□□ 1.85
LMBR1-217ENST00000485985 ITGA6P23229 1130 aa26.58■■□□□ 1.85
LMBR1-217ENST00000485985 ANGEL2Q5VTE6 544 aaKnown RBP26.58■■□□□ 1.85
LMBR1-217ENST00000485985 CSF1RP07333 972 aa26.57■■□□□ 1.84
LMBR1-217ENST00000485985 SLC10A3P09131 477 aa26.57■■□□□ 1.84
LMBR1-217ENST00000485985 USP17L8P0C7I0 530 aa26.57■■□□□ 1.84
LMBR1-217ENST00000485985 BEND3Q5T5X7 828 aa26.57■■□□□ 1.84
LMBR1-217ENST00000485985 PODNQ7Z5L7 613 aa26.57■■□□□ 1.84
LMBR1-217ENST00000485985 MYOZ2Q9NPC6 264 aa26.56■■□□□ 1.84
LMBR1-217ENST00000485985 RNF186Q9NXI6 227 aa26.56■■□□□ 1.84
LMBR1-217ENST00000485985 USP17L3A6NCW0 530 aa26.55■■□□□ 1.84
LMBR1-217ENST00000485985 USP17L4A6NCW7 530 aa26.55■■□□□ 1.84
LMBR1-217ENST00000485985 TRPA1O75762 1119 aa26.55■■□□□ 1.84
LMBR1-217ENST00000485985 CCT4P50991 539 aaKnown RBP26.55■■□□□ 1.84
LMBR1-217ENST00000485985 USP17L1Q7RTZ2 530 aa26.55■■□□□ 1.84
LMBR1-217ENST00000485985 AKAP11Q9UKA4 1901 aa26.55■■□□□ 1.84
LMBR1-217ENST00000485985 IGHMBP2P38935 993 aaKnown RBP26.54■■□□□ 1.84
LMBR1-217ENST00000485985 CSRNP1Q96S65 589 aa26.54■■□□□ 1.84
LMBR1-217ENST00000485985 FOXO4P98177 505 aa26.53■■□□□ 1.84
LMBR1-217ENST00000485985 PITPNM2Q9BZ72 1349 aa26.53■■□□□ 1.84
LMBR1-217ENST00000485985 FKBP1BP68106 108 aa26.52■■□□□ 1.84
LMBR1-217ENST00000485985 TXNRD3Q86VQ6 643 aa26.52■■□□□ 1.84
LMBR1-217ENST00000485985 KLRK1P26718 216 aa26.51■■□□□ 1.83
LMBR1-217ENST00000485985 RASAL3Q86YV0 1011 aa26.5■■□□□ 1.83
LMBR1-217ENST00000485985 REM2Q8IYK8 340 aaPredicted RBP26.5■■□□□ 1.83
LMBR1-217ENST00000485985 PAPPA2Q9BXP8 1791 aa26.49■■□□□ 1.83
LMBR1-217ENST00000485985 EPHA10Q5JZY3 1008 aa26.49■■□□□ 1.83
LMBR1-217ENST00000485985 MPHOSPH8Q99549 860 aa26.49■■□□□ 1.83
LMBR1-217ENST00000485985 LEMD3Q9Y2U8 911 aa26.49■■□□□ 1.83
LMBR1-217ENST00000485985 ZNF804BA4D1E1 1349 aa26.48■■□□□ 1.83
LMBR1-217ENST00000485985 GRM8O00222 908 aa26.48■■□□□ 1.83
LMBR1-217ENST00000485985 CHRNDQ07001 517 aa26.48■■□□□ 1.83
LMBR1-217ENST00000485985 DACT2Q5SW24 774 aa26.48■■□□□ 1.83
LMBR1-217ENST00000485985 SCAF8Q9UPN6 1271 aaKnown RBP26.48■■□□□ 1.83
LMBR1-217ENST00000485985 ANKRD18BA2A2Z9 1011 aa26.47■■□□□ 1.83
LMBR1-217ENST00000485985 NBPF9Q3BBW0 867 aa26.47■■□□□ 1.83
LMBR1-217ENST00000485985 MXD3Q9BW11 206 aa26.47■■□□□ 1.83
LMBR1-217ENST00000485985 ANKRD2Q9GZV1 360 aa26.47■■□□□ 1.83
LMBR1-217ENST00000485985 SLC4A10Q6U841 1118 aa26.46■■□□□ 1.83
LMBR1-217ENST00000485985 MOB2Q70IA6 237 aa26.46■■□□□ 1.83
LMBR1-217ENST00000485985 COA1Q9GZY4 146 aa26.46■■□□□ 1.83
LMBR1-217ENST00000485985 CHMP3Q9Y3E7 222 aa26.46■■□□□ 1.83
LMBR1-217ENST00000485985 IRS2Q9Y4H2 1338 aa26.45■■□□□ 1.83
LMBR1-217ENST00000485985 ECM29Q5VYK3 1845 aa26.45■■□□□ 1.82
LMBR1-217ENST00000485985 ALDH1L1O75891 902 aa26.45■■□□□ 1.82
LMBR1-217ENST00000485985 SLC34A2O95436 690 aa26.45■■□□□ 1.82
LMBR1-217ENST00000485985 IFIT5Q13325 482 aaKnown RBP26.45■■□□□ 1.82
LMBR1-217ENST00000485985 STRIP1Q5VSL9 837 aa26.45■■□□□ 1.82
LMBR1-217ENST00000485985 LMBR1LQ6UX01 489 aa26.45■■□□□ 1.82
LMBR1-217ENST00000485985 OGFOD1Q8N543 542 aa26.45■■□□□ 1.82
LMBR1-217ENST00000485985 MYO3BQ8WXR4 1341 aa26.44■■□□□ 1.82
LMBR1-217ENST00000485985 SNAP23O00161 211 aa26.44■■□□□ 1.82
LMBR1-217ENST00000485985 PRAMEF18Q5VWM3 479 aa26.44■■□□□ 1.82
LMBR1-217ENST00000485985 MRPL50Q8N5N7 158 aaKnown RBP26.44■■□□□ 1.82
LMBR1-217ENST00000485985 SRCIN1Q9C0H9 1055 aa26.44■■□□□ 1.82
LMBR1-217ENST00000485985 E9PSI1 815 aa26.43■■□□□ 1.82
LMBR1-217ENST00000485985 UBE2Q2LH0YL09 131 aa26.43■■□□□ 1.82
LMBR1-217ENST00000485985 WNT10BO00744 389 aa26.43■■□□□ 1.82
LMBR1-217ENST00000485985 FBXW7Q969H0 707 aa26.43■■□□□ 1.82
LMBR1-217ENST00000485985 TAF5LO75529 589 aa26.42■■□□□ 1.82
LMBR1-217ENST00000485985 HELBQ8NG08 1087 aaPredicted RBP26.42■■□□□ 1.82
LMBR1-217ENST00000485985 ZNF594Q96JF6 807 aaPredicted RBP26.42■■□□□ 1.82
LMBR1-217ENST00000485985 C9orf78Q9NZ63 289 aaPredicted RBP26.42■■□□□ 1.82
LMBR1-217ENST00000485985 KCNJ4P48050 445 aa26.41■■□□□ 1.82
LMBR1-217ENST00000485985 SLFN5Q08AF3 891 aa26.41■■□□□ 1.82
LMBR1-217ENST00000485985 CTU1Q7Z7A3 348 aaKnown RBP26.41■■□□□ 1.82
LMBR1-217ENST00000485985 KAZALD1Q96I82 304 aa26.41■■□□□ 1.82
LMBR1-217ENST00000485985 ARAP2Q8WZ64 1704 aa26.41■■□□□ 1.82
LMBR1-217ENST00000485985 MMP14P50281 582 aa26.4■■□□□ 1.82
LMBR1-217ENST00000485985 CDCA7LQ96GN5 454 aa26.4■■□□□ 1.82
LMBR1-217ENST00000485985 SUCLG2Q96I99 432 aa26.4■■□□□ 1.82
LMBR1-217ENST00000485985 NBPF7P0C2Y1 421 aaPredicted RBP26.39■■□□□ 1.82
LMBR1-217ENST00000485985 TTLL12Q14166 644 aaPredicted RBP26.39■■□□□ 1.82
LMBR1-217ENST00000485985 TTLL5Q6EMB2 1281 aa26.39■■□□□ 1.82
LMBR1-217ENST00000485985 SSH1Q8WYL5 1049 aa26.39■■□□□ 1.82
LMBR1-217ENST00000485985 UTYO14607 1347 aa26.39■■□□□ 1.81
LMBR1-217ENST00000485985 SASH1O94885 1247 aa26.38■■□□□ 1.81
LMBR1-217ENST00000485985 NF2P35240 595 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms