RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 TIAM2Q8IVF5 1701 aa29.26■■■□□ 2.27
ABCF3-216ENST00000485921 ECE2O60344 883 aa29.25■■■□□ 2.27
ABCF3-216ENST00000485921 SASH1O94885 1247 aa29.25■■■□□ 2.27
ABCF3-216ENST00000485921 FGFR2P21802 821 aa29.25■■■□□ 2.27
ABCF3-216ENST00000485921 EXOC6BQ9Y2D4 811 aa29.25■■■□□ 2.27
ABCF3-216ENST00000485921 EIF6P56537 245 aaKnown RBP29.24■■■□□ 2.27
ABCF3-216ENST00000485921 YDJCA8MPS7 323 aa29.23■■■□□ 2.27
ABCF3-216ENST00000485921 IFIT1P09914 478 aaKnown RBP29.23■■■□□ 2.27
ABCF3-216ENST00000485921 SLC5A1P13866 664 aa29.23■■■□□ 2.27
ABCF3-216ENST00000485921 ATP2B3Q16720 1220 aa29.23■■■□□ 2.27
ABCF3-216ENST00000485921 HSP90AB4PQ58FF6 505 aa29.23■■■□□ 2.27
ABCF3-216ENST00000485921 LPIN2Q92539 896 aa29.23■■■□□ 2.27
ABCF3-216ENST00000485921 COA1Q9GZY4 146 aa29.23■■■□□ 2.27
ABCF3-216ENST00000485921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.23■■■□□ 2.27
ABCF3-216ENST00000485921 ZNF541Q9H0D2 1346 aa29.22■■■□□ 2.27
ABCF3-216ENST00000485921 DPY19L2Q6NUT2 758 aa29.22■■■□□ 2.27
ABCF3-216ENST00000485921 AKAP2Q9Y2D5 859 aa29.22■■■□□ 2.27
ABCF3-216ENST00000485921 ZNF804AQ7Z570 1209 aa29.21■■■□□ 2.27
ABCF3-216ENST00000485921 ERC1Q8IUD2 1116 aa29.21■■■□□ 2.27
ABCF3-216ENST00000485921 GLTPD2A6NH11 291 aa29.2■■■□□ 2.26
ABCF3-216ENST00000485921 GYG1P46976 350 aa29.2■■■□□ 2.26
ABCF3-216ENST00000485921 CXCL9Q07325 125 aa29.2■■■□□ 2.26
ABCF3-216ENST00000485921 PODNQ7Z5L7 613 aa29.2■■■□□ 2.26
ABCF3-216ENST00000485921 FAM84BQ96KN1 310 aaPredicted RBP29.2■■■□□ 2.26
ABCF3-216ENST00000485921 RAD17O75943 681 aa29.19■■■□□ 2.26
ABCF3-216ENST00000485921 HIBADHP31937 336 aaKnown RBP29.19■■■□□ 2.26
ABCF3-216ENST00000485921 CD209Q9NNX6 404 aa29.19■■■□□ 2.26
ABCF3-216ENST00000485921 KCNQ5Q9NR82 932 aa29.19■■■□□ 2.26
ABCF3-216ENST00000485921 TIMM10P62072 90 aa29.18■■■□□ 2.26
ABCF3-216ENST00000485921 CAVIN4Q5BKX8 364 aa29.18■■■□□ 2.26
ABCF3-216ENST00000485921 CIAPIN1Q6FI81 312 aa29.18■■■□□ 2.26
ABCF3-216ENST00000485921 A0A1B0GUL7 405 aa29.17■■■□□ 2.26
ABCF3-216ENST00000485921 DDNO94850 711 aaPredicted RBP29.17■■■□□ 2.26
ABCF3-216ENST00000485921 FBXO33Q7Z6M2 555 aa29.17■■■□□ 2.26
ABCF3-216ENST00000485921 ZNF526Q8TF50 670 aaPredicted RBP29.17■■■□□ 2.26
ABCF3-216ENST00000485921 GJA3Q9Y6H8 435 aa29.17■■■□□ 2.26
ABCF3-216ENST00000485921 APBB1O00213 710 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 RAB11FIP3O75154 756 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 TNIP1Q15025 636 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 VPS37DQ86XT2 251 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 GPC2Q8N158 579 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 GPR108Q9NPR9 543 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 KDM2BQ8NHM5 1336 aa29.16■■■□□ 2.26
ABCF3-216ENST00000485921 BCAMP50895 628 aa29.15■■■□□ 2.26
ABCF3-216ENST00000485921 RHPN1Q8TCX5 695 aa29.15■■■□□ 2.26
ABCF3-216ENST00000485921 NEUROD6Q96NK8 337 aa29.15■■■□□ 2.26
ABCF3-216ENST00000485921 DCTPP1Q9H773 170 aa29.15■■■□□ 2.26
ABCF3-216ENST00000485921 IL1R1P14778 569 aa29.14■■■□□ 2.26
ABCF3-216ENST00000485921 ADORA1P30542 326 aa29.14■■■□□ 2.26
ABCF3-216ENST00000485921 TNNI3KQ59H18 835 aa29.14■■■□□ 2.26
ABCF3-216ENST00000485921 KIF1BPQ96EK5 621 aa29.14■■■□□ 2.26
ABCF3-216ENST00000485921 FPGT-TNNI3KV9GXZ4 949 aa29.14■■■□□ 2.26
ABCF3-216ENST00000485921 ZNF609O15014 1411 aa29.13■■■□□ 2.25
ABCF3-216ENST00000485921 PSMD14O00487 310 aa29.13■■■□□ 2.25
ABCF3-216ENST00000485921 HDAC1Q13547 482 aaPredicted RBP29.13■■■□□ 2.25
ABCF3-216ENST00000485921 XAGE2Q96GT9 111 aa29.13■■■□□ 2.25
ABCF3-216ENST00000485921 SCN9AQ15858 1988 aa29.12■■■□□ 2.25
ABCF3-216ENST00000485921 USP17L3A6NCW0 530 aa29.12■■■□□ 2.25
ABCF3-216ENST00000485921 USP17L4A6NCW7 530 aa29.12■■■□□ 2.25
ABCF3-216ENST00000485921 USP17L1Q7RTZ2 530 aa29.12■■■□□ 2.25
ABCF3-216ENST00000485921 TDRD7Q8NHU6 1098 aaKnown RBP29.12■■■□□ 2.25
ABCF3-216ENST00000485921 ZNF784Q8NCA9 323 aaPredicted RBP29.11■■■□□ 2.25
ABCF3-216ENST00000485921 FBXW7Q969H0 707 aa29.11■■■□□ 2.25
ABCF3-216ENST00000485921 IL1RAPL2Q9NP60 686 aa29.11■■■□□ 2.25
ABCF3-216ENST00000485921 VIL1P09327 827 aaKnown RBP29.1■■■□□ 2.25
ABCF3-216ENST00000485921 GTF2IP78347 998 aa29.1■■■□□ 2.25
ABCF3-216ENST00000485921 TTLL5Q6EMB2 1281 aa29.1■■■□□ 2.25
ABCF3-216ENST00000485921 EAF2Q96CJ1 260 aaPredicted RBP29.1■■■□□ 2.25
ABCF3-216ENST00000485921 IQSEC3Q9UPP2 1182 aaPredicted RBP29.1■■■□□ 2.25
ABCF3-216ENST00000485921 STRIP1Q5VSL9 837 aa29.09■■■□□ 2.25
ABCF3-216ENST00000485921 RWDD1Q9H446 243 aaPredicted RBP29.09■■■□□ 2.25
ABCF3-216ENST00000485921 GPBP1L1Q9HC44 474 aaPredicted RBP29.09■■■□□ 2.25
ABCF3-216ENST00000485921 FRAT2O75474 233 aaPredicted RBP29.08■■■□□ 2.25
ABCF3-216ENST00000485921 PHKA1P46020 1223 aa29.08■■■□□ 2.25
ABCF3-216ENST00000485921 GORABQ5T7V8 394 aa29.08■■■□□ 2.25
ABCF3-216ENST00000485921 CCDC102BQ68D86 513 aa29.08■■■□□ 2.25
ABCF3-216ENST00000485921 L3MBTL3Q96JM7 780 aaPredicted RBP29.08■■■□□ 2.25
ABCF3-216ENST00000485921 LRRCC1Q9C099 1032 aa29.08■■■□□ 2.25
ABCF3-216ENST00000485921 GNL3LQ9NVN8 582 aaKnown RBP29.08■■■□□ 2.25
ABCF3-216ENST00000485921 ZBTB12Q9Y330 459 aaPredicted RBP29.08■■■□□ 2.25
ABCF3-216ENST00000485921 GMPSP49915 693 aaPredicted RBP29.07■■■□□ 2.24
ABCF3-216ENST00000485921 DACT2Q5SW24 774 aa29.07■■■□□ 2.24
ABCF3-216ENST00000485921 RSBN1LQ6PCB5 846 aaPredicted RBP29.07■■■□□ 2.24
ABCF3-216ENST00000485921 AACSQ86V21 672 aa29.07■■■□□ 2.24
ABCF3-216ENST00000485921 CLASRPQ8N2M8 674 aaKnown RBP29.07■■■□□ 2.24
ABCF3-216ENST00000485921 ARAP2Q8WZ64 1704 aa29.07■■■□□ 2.24
ABCF3-216ENST00000485921 CCDC8Q9H0W5 538 aaPredicted RBP29.07■■■□□ 2.24
ABCF3-216ENST00000485921 RRAGCQ9HB90 399 aa29.07■■■□□ 2.24
ABCF3-216ENST00000485921 NEFLP07196 543 aa29.06■■■□□ 2.24
ABCF3-216ENST00000485921 DBNDD2Q9BQY9 259 aa29.06■■■□□ 2.24
ABCF3-216ENST00000485921 BCL11AQ9H165 835 aa29.06■■■□□ 2.24
ABCF3-216ENST00000485921 NMRK2Q9NPI5 230 aa29.06■■■□□ 2.24
ABCF3-216ENST00000485921 JAG2Q9Y219 1238 aa29.06■■■□□ 2.24
ABCF3-216ENST00000485921 SMARCA5O60264 1052 aaPredicted RBP29.05■■■□□ 2.24
ABCF3-216ENST00000485921 MXD3Q9BW11 206 aa29.05■■■□□ 2.24
ABCF3-216ENST00000485921 FAM205AQ6ZU69 1335 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 WDR90Q96KV7 1748 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 POTECB2RU33 542 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 IGHDP01880 384 aa29.04■■■□□ 2.24
ABCF3-216ENST00000485921 RPS12P25398 132 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms