RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 KIF3CO14782 793 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 ALDH1B1P30837 517 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 UBE4AQ14139 1066 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 TMC4Q7Z404 712 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 LPIN2Q92539 896 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 MYH7P12883 1935 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 PPEF1O14829 653 aaPredicted RBP13.84□□□□□ -0.19
SND1-212ENST00000485871 GLRX3O76003 335 aaKnown RBP13.84□□□□□ -0.19
SND1-212ENST00000485871 ATP5JP18859 108 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 SP8Q8IXZ3 490 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 NEUROD6Q96NK8 337 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 ANKRD2Q9GZV1 360 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 PODXL2Q9NZ53 605 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 WWC3Q9ULE0 1092 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 ATP6V0A2Q9Y487 856 aa13.84□□□□□ -0.19
SND1-212ENST00000485871 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 SLC5A1P13866 664 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 SDSP20132 328 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 GPSM2P81274 684 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 DNAJC5GQ8N7S2 189 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.83□□□□□ -0.2
SND1-212ENST00000485871 C7orf43Q8WVR3 580 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 GPATCH3Q96I76 525 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
SND1-212ENST00000485871 ZNF804BA4D1E1 1349 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 XDHP47989 1333 aa13.83□□□□□ -0.2
SND1-212ENST00000485871 ZNF646O15015 1829 aaPredicted RBP13.83□□□□□ -0.2
SND1-212ENST00000485871 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
SND1-212ENST00000485871 ERC2O15083 957 aa13.82□□□□□ -0.2
SND1-212ENST00000485871 ZBTB22O15209 634 aa13.82□□□□□ -0.2
SND1-212ENST00000485871 DPEP1P16444 411 aa13.82□□□□□ -0.2
SND1-212ENST00000485871 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
SND1-212ENST00000485871 TGFB2P61812 414 aa13.82□□□□□ -0.2
SND1-212ENST00000485871 PRPF40BQ6NWY9 871 aaKnown RBP13.82□□□□□ -0.2
SND1-212ENST00000485871 C15orf52Q6ZUT6 534 aaKnown RBP13.82□□□□□ -0.2
SND1-212ENST00000485871 CNKSR1Q969H4 720 aa13.82□□□□□ -0.2
SND1-212ENST00000485871 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.2
SND1-212ENST00000485871 TOMM70O94826 608 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
SND1-212ENST00000485871 KLRK1P26718 216 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 PHKA1P46020 1223 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 SCARF1Q14162 830 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 CCDC102BQ68D86 513 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 BOLA2Q9H3K6 86 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
SND1-212ENST00000485871 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
SND1-212ENST00000485871 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
SND1-212ENST00000485871 ATP2B4P23634 1241 aa13.8□□□□□ -0.2
SND1-212ENST00000485871 COL13A1Q5TAT6 717 aaPredicted RBP13.8□□□□□ -0.2
SND1-212ENST00000485871 OLFM4Q6UX06 510 aa13.8□□□□□ -0.2
SND1-212ENST00000485871 HAUS7Q99871 368 aa13.8□□□□□ -0.2
SND1-212ENST00000485871 PSME4Q14997 1843 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 MCAMP43121 646 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 FBXO33Q7Z6M2 555 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 TBC1D16Q8TBP0 767 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 FAM84BQ96KN1 310 aaPredicted RBP13.79□□□□□ -0.2
SND1-212ENST00000485871 POLLQ9UGP5 575 aa13.79□□□□□ -0.2
SND1-212ENST00000485871 MAP4K4O95819 1239 aaPredicted RBP13.78□□□□□ -0.2
SND1-212ENST00000485871 GYG1P46976 350 aa13.78□□□□□ -0.2
SND1-212ENST00000485871 BCAMP50895 628 aa13.78□□□□□ -0.2
SND1-212ENST00000485871 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
SND1-212ENST00000485871 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
SND1-212ENST00000485871 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
SND1-212ENST00000485871 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
SND1-212ENST00000485871 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
SND1-212ENST00000485871 UFL1O94874 794 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 CC2D2BQ6DHV5 1058 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 MAST2Q6P0Q8 1798 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 PI16Q6UXB8 463 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 TTLL6Q8N841 843 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 GPR101Q96P66 508 aaPredicted RBP13.77□□□□□ -0.21
SND1-212ENST00000485871 RTFDC1Q9BY42 306 aaPredicted RBP13.77□□□□□ -0.21
SND1-212ENST00000485871 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
SND1-212ENST00000485871 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 CDC45O75419 566 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 ZAP70P43403 619 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 KCNJ4P48050 445 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 CNTROBQ8N137 903 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 MPNDQ8N594 471 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 DDRGK1Q96HY6 314 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 IPO9Q96P70 1041 aaKnown RBP13.76□□□□□ -0.21
SND1-212ENST00000485871 ANTXR1Q9H6X2 564 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
SND1-212ENST00000485871 PDS5AQ29RF7 1337 aaKnown RBP13.75□□□□□ -0.21
SND1-212ENST00000485871 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
SND1-212ENST00000485871 PRELPP51888 382 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 206.9 ms