RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 UBE4AQ14139 1066 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 CIAPIN1Q6FI81 312 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 SSH3Q8TE77 659 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 RRAGCQ9HB90 399 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 CEP126Q9P2H0 1117 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.06
HPS4-214ENST00000485842 PUM3Q15397 648 aaKnown RBP14.69□□□□□ -0.06
HPS4-214ENST00000485842 ZNF804AQ7Z570 1209 aa14.69□□□□□ -0.06
HPS4-214ENST00000485842 GPC2Q8N158 579 aa14.69□□□□□ -0.06
HPS4-214ENST00000485842 FBXW7Q969H0 707 aa14.69□□□□□ -0.06
HPS4-214ENST00000485842 COA1Q9GZY4 146 aa14.69□□□□□ -0.06
HPS4-214ENST00000485842 KCNQ5Q9NR82 932 aa14.69□□□□□ -0.06
HPS4-214ENST00000485842 PSME4Q14997 1843 aa14.69□□□□□ -0.06
HPS4-214ENST00000485842 IRS2Q9Y4H2 1338 aa14.68□□□□□ -0.06
HPS4-214ENST00000485842 PSMD14O00487 310 aa14.68□□□□□ -0.06
HPS4-214ENST00000485842 SURF6O75683 361 aaKnown RBP14.68□□□□□ -0.06
HPS4-214ENST00000485842 GYG1P46976 350 aa14.68□□□□□ -0.06
HPS4-214ENST00000485842 TNIP1Q15025 636 aa14.68□□□□□ -0.06
HPS4-214ENST00000485842 ATP2B3Q16720 1220 aa14.68□□□□□ -0.06
HPS4-214ENST00000485842 C15orf52Q6ZUT6 534 aaKnown RBP14.68□□□□□ -0.06
HPS4-214ENST00000485842 IFIT1P09914 478 aaKnown RBP14.67□□□□□ -0.06
HPS4-214ENST00000485842 SLC5A1P13866 664 aa14.67□□□□□ -0.06
HPS4-214ENST00000485842 TFCP2Q12800 502 aa14.67□□□□□ -0.06
HPS4-214ENST00000485842 PODNQ7Z5L7 613 aa14.67□□□□□ -0.06
HPS4-214ENST00000485842 RPAP2Q8IXW5 612 aaPredicted RBP14.67□□□□□ -0.06
HPS4-214ENST00000485842 L3MBTL3Q96JM7 780 aaPredicted RBP14.67□□□□□ -0.06
HPS4-214ENST00000485842 ARAP2Q8WZ64 1704 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 SCN4AP35499 1836 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 HMMRO75330 724 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 FGFR2P21802 821 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 LMOD1P29536 600 aaPredicted RBP14.66□□□□□ -0.06
HPS4-214ENST00000485842 GMPSP49915 693 aaPredicted RBP14.66□□□□□ -0.06
HPS4-214ENST00000485842 VPS37DQ86XT2 251 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 CD209Q9NNX6 404 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 EXOC6BQ9Y2D4 811 aa14.66□□□□□ -0.06
HPS4-214ENST00000485842 ZNF646O15015 1829 aaPredicted RBP14.65□□□□□ -0.06
HPS4-214ENST00000485842 IQCA1LA6NCM1 817 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 USP17L3A6NCW0 530 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 USP17L4A6NCW7 530 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 POTECB2RU33 542 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 KIF3CO14782 793 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 VEGFAP15692 232 aaPredicted RBP14.65□□□□□ -0.06
HPS4-214ENST00000485842 HIBADHP31937 336 aaKnown RBP14.65□□□□□ -0.06
HPS4-214ENST00000485842 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 USP17L1Q7RTZ2 530 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 SIRT2Q8IXJ6 389 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 C16orf71Q8IYS4 520 aaPredicted RBP14.65□□□□□ -0.06
HPS4-214ENST00000485842 LPIN2Q92539 896 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 FAM84BQ96KN1 310 aaPredicted RBP14.65□□□□□ -0.06
HPS4-214ENST00000485842 HACL1Q9UJ83 578 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
HPS4-214ENST00000485842 ZNF609O15014 1411 aa14.65□□□□□ -0.06
HPS4-214ENST00000485842 SASH1O94885 1247 aa14.64□□□□□ -0.07
HPS4-214ENST00000485842 SCNN1DP51172 638 aa14.64□□□□□ -0.07
HPS4-214ENST00000485842 GTF2IP78347 998 aa14.64□□□□□ -0.07
HPS4-214ENST00000485842 IRX6P78412 446 aaPredicted RBP14.64□□□□□ -0.07
HPS4-214ENST00000485842 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
HPS4-214ENST00000485842 JAG2Q9Y219 1238 aa14.64□□□□□ -0.07
HPS4-214ENST00000485842 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
HPS4-214ENST00000485842 NOP58Q9Y2X3 529 aaKnown RBP14.64□□□□□ -0.07
HPS4-214ENST00000485842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.64□□□□□ -0.07
HPS4-214ENST00000485842 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
HPS4-214ENST00000485842 A0A1B0GUL7 405 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 APBB1O00213 710 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 VIL1P09327 827 aaKnown RBP14.63□□□□□ -0.07
HPS4-214ENST00000485842 IL1R1P14778 569 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 ADORA1P30542 326 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 EPS15P42566 896 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 BCAMP50895 628 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 GPRC5DQ9NZD1 345 aa14.63□□□□□ -0.07
HPS4-214ENST00000485842 SHTN1A0MZ66 631 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
HPS4-214ENST00000485842 EPHX2P34913 555 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 EAPPQ56P03 285 aaPredicted RBP14.62□□□□□ -0.07
HPS4-214ENST00000485842 DACT2Q5SW24 774 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 STRIP1Q5VSL9 837 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 RSBN1LQ6PCB5 846 aaPredicted RBP14.62□□□□□ -0.07
HPS4-214ENST00000485842 FBXO33Q7Z6M2 555 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 NEUROD6Q96NK8 337 aa14.62□□□□□ -0.07
HPS4-214ENST00000485842 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
HPS4-214ENST00000485842 RPS12P25398 132 aaKnown RBP14.61□□□□□ -0.07
HPS4-214ENST00000485842 TIMM10P62072 90 aa14.61□□□□□ -0.07
HPS4-214ENST00000485842 CHAF1AQ13111 956 aaPredicted RBP14.61□□□□□ -0.07
HPS4-214ENST00000485842 HSP90AB4PQ58FF6 505 aa14.61□□□□□ -0.07
HPS4-214ENST00000485842 ERC1Q8IUD2 1116 aa14.61□□□□□ -0.07
HPS4-214ENST00000485842 MICALL2Q8IY33 904 aa14.61□□□□□ -0.07
HPS4-214ENST00000485842 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
HPS4-214ENST00000485842 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
HPS4-214ENST00000485842 CNOT7Q9UIV1 285 aaKnown RBP14.61□□□□□ -0.07
HPS4-214ENST00000485842 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
HPS4-214ENST00000485842 PHKA1P46020 1223 aa14.6□□□□□ -0.07
HPS4-214ENST00000485842 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
HPS4-214ENST00000485842 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
HPS4-214ENST00000485842 AGBL3Q8NEM8 1001 aa14.6□□□□□ -0.07
HPS4-214ENST00000485842 XAGE2Q96GT9 111 aa14.6□□□□□ -0.07
HPS4-214ENST00000485842 FPGT-TNNI3KV9GXZ4 949 aa14.6□□□□□ -0.07
HPS4-214ENST00000485842 H7C1D1 291 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms