RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 FBXW7Q969H0 707 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 LEMD3Q9Y2U8 911 aa14.73□□□□□ -0.05
APTX-227ENST00000485479 ADORA1P30542 326 aa14.72□□□□□ -0.05
APTX-227ENST00000485479 IL15P40933 162 aaPredicted RBP14.72□□□□□ -0.05
APTX-227ENST00000485479 TIMM10P62072 90 aa14.72□□□□□ -0.05
APTX-227ENST00000485479 RPAP2Q8IXW5 612 aaPredicted RBP14.72□□□□□ -0.05
APTX-227ENST00000485479 MXD3Q9BW11 206 aa14.72□□□□□ -0.05
APTX-227ENST00000485479 CEP126Q9P2H0 1117 aa14.72□□□□□ -0.05
APTX-227ENST00000485479 FZD9O00144 591 aa14.71□□□□□ -0.05
APTX-227ENST00000485479 PUM3Q15397 648 aaKnown RBP14.71□□□□□ -0.05
APTX-227ENST00000485479 CHMP4BQ9H444 224 aaKnown RBP14.71□□□□□ -0.05
APTX-227ENST00000485479 IL1RAPL2Q9NP60 686 aa14.71□□□□□ -0.05
APTX-227ENST00000485479 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
APTX-227ENST00000485479 CENPBP07199 599 aaPredicted RBP14.71□□□□□ -0.06
APTX-227ENST00000485479 BCAMP50895 628 aa14.71□□□□□ -0.06
APTX-227ENST00000485479 CXCL9Q07325 125 aa14.71□□□□□ -0.06
APTX-227ENST00000485479 ATP2B3Q16720 1220 aa14.71□□□□□ -0.06
APTX-227ENST00000485479 NMRK2Q9NPI5 230 aa14.71□□□□□ -0.06
APTX-227ENST00000485479 ZNRF3Q9ULT6 936 aa14.71□□□□□ -0.06
APTX-227ENST00000485479 FGFR2P21802 821 aa14.7□□□□□ -0.06
APTX-227ENST00000485479 UBE4AQ14139 1066 aa14.7□□□□□ -0.06
APTX-227ENST00000485479 ZNF784Q8NCA9 323 aaPredicted RBP14.7□□□□□ -0.06
APTX-227ENST00000485479 A0A1B0GUL7 405 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 SHTN1A0MZ66 631 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 PSMD14O00487 310 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 FAM84BQ96KN1 310 aaPredicted RBP14.69□□□□□ -0.06
APTX-227ENST00000485479 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 TLR7Q9NYK1 1049 aaKnown RBP14.69□□□□□ -0.06
APTX-227ENST00000485479 ZNF609O15014 1411 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 SMARCA5O60264 1052 aaPredicted RBP14.69□□□□□ -0.06
APTX-227ENST00000485479 HMMRO75330 724 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 EIF6P56537 245 aaKnown RBP14.69□□□□□ -0.06
APTX-227ENST00000485479 CD209Q9NNX6 404 aa14.69□□□□□ -0.06
APTX-227ENST00000485479 NOP58Q9Y2X3 529 aaKnown RBP14.69□□□□□ -0.06
APTX-227ENST00000485479 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
APTX-227ENST00000485479 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
APTX-227ENST00000485479 SLC5A1P13866 664 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 PHKA1P46020 1223 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 VPS37DQ86XT2 251 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 LPIN2Q92539 896 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
APTX-227ENST00000485479 IFIT1P09914 478 aaKnown RBP14.67□□□□□ -0.06
APTX-227ENST00000485479 GTF2IP78347 998 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 CIAPIN1Q6FI81 312 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 DPY19L2Q6NUT2 758 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 ZNF804AQ7Z570 1209 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 XAGE2Q96GT9 111 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 RRAGCQ9HB90 399 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
APTX-227ENST00000485479 ZNF646O15015 1829 aaPredicted RBP14.67□□□□□ -0.06
APTX-227ENST00000485479 ARAP2Q8WZ64 1704 aa14.66□□□□□ -0.06
APTX-227ENST00000485479 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
APTX-227ENST00000485479 CHAF1AQ13111 956 aaPredicted RBP14.66□□□□□ -0.06
APTX-227ENST00000485479 EAF2Q96CJ1 260 aaPredicted RBP14.66□□□□□ -0.06
APTX-227ENST00000485479 DBNDD2Q9BQY9 259 aa14.66□□□□□ -0.06
APTX-227ENST00000485479 COA1Q9GZY4 146 aa14.66□□□□□ -0.06
APTX-227ENST00000485479 VPS33BQ9H267 617 aa14.66□□□□□ -0.06
APTX-227ENST00000485479 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
APTX-227ENST00000485479 COL1A1P02452 1464 aaPredicted RBP14.66□□□□□ -0.06
APTX-227ENST00000485479 IGHDP01880 384 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 PI16Q6UXB8 463 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 POTECB2RU33 542 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 FRAT2O75474 233 aaPredicted RBP14.65□□□□□ -0.06
APTX-227ENST00000485479 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.06
APTX-227ENST00000485479 SCNN1DP51172 638 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 AACSQ86V21 672 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 GPC2Q8N158 579 aa14.65□□□□□ -0.06
APTX-227ENST00000485479 MYH13Q9UKX3 1938 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 ZC3H4Q9UPT8 1303 aaKnown RBP14.64□□□□□ -0.07
APTX-227ENST00000485479 F8W031 263 aaPredicted RBP14.64□□□□□ -0.07
APTX-227ENST00000485479 CCDC102BQ68D86 513 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 C15orf52Q6ZUT6 534 aaKnown RBP14.64□□□□□ -0.07
APTX-227ENST00000485479 PODNQ7Z5L7 613 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 FBXO33Q7Z6M2 555 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 DBNLQ9UJU6 430 aaKnown RBP14.64□□□□□ -0.07
APTX-227ENST00000485479 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 PSME4Q14997 1843 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 USP17L3A6NCW0 530 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 USP17L4A6NCW7 530 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 EPS15P42566 896 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 USP17L1Q7RTZ2 530 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 DCTPP1Q9H773 170 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
APTX-227ENST00000485479 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 EGFRP00533 1210 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 IL1R1P14778 569 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 SCARF1Q14162 830 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 GRIK5Q16478 980 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 GORABQ5T7V8 394 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 B4GALNT3Q6L9W6 998 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 CERS5Q8N5B7 392 aa14.63□□□□□ -0.07
APTX-227ENST00000485479 KIF1BPQ96EK5 621 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms