RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 LRRC24Q50LG9 513 aa23.9■■□□□ 1.42
SNX17-206ENST00000484886 MICALL2Q8IY33 904 aa23.89■■□□□ 1.41
SNX17-206ENST00000484886 ADARB2Q9NS39 739 aaKnown RBP23.89■■□□□ 1.41
SNX17-206ENST00000484886 CNOT7Q9UIV1 285 aaKnown RBP23.89■■□□□ 1.41
SNX17-206ENST00000484886 RIPOR2Q9Y4F9 1068 aa23.89■■□□□ 1.41
SNX17-206ENST00000484886 USP17L3A6NCW0 530 aa23.88■■□□□ 1.41
SNX17-206ENST00000484886 USP17L4A6NCW7 530 aa23.88■■□□□ 1.41
SNX17-206ENST00000484886 H7C1D1 291 aa23.88■■□□□ 1.41
SNX17-206ENST00000484886 RPS12P25398 132 aaKnown RBP23.88■■□□□ 1.41
SNX17-206ENST00000484886 USP50Q70EL3 339 aaPredicted RBP23.88■■□□□ 1.41
SNX17-206ENST00000484886 USP17L1Q7RTZ2 530 aa23.88■■□□□ 1.41
SNX17-206ENST00000484886 ZNF804AQ7Z570 1209 aa23.88■■□□□ 1.41
SNX17-206ENST00000484886 GNAI2P04899 355 aa23.87■■□□□ 1.41
SNX17-206ENST00000484886 VIL1P09327 827 aaKnown RBP23.87■■□□□ 1.41
SNX17-206ENST00000484886 SIL1Q9H173 461 aa23.87■■□□□ 1.41
SNX17-206ENST00000484886 SHTN1A0MZ66 631 aa23.86■■□□□ 1.41
SNX17-206ENST00000484886 RLBP1P12271 317 aa23.86■■□□□ 1.41
SNX17-206ENST00000484886 RFX5P48382 616 aaPredicted RBP23.86■■□□□ 1.41
SNX17-206ENST00000484886 PTPN12Q05209 780 aaKnown RBP23.86■■□□□ 1.41
SNX17-206ENST00000484886 DPF2Q92785 391 aa23.86■■□□□ 1.41
SNX17-206ENST00000484886 PSME4Q14997 1843 aa23.86■■□□□ 1.41
SNX17-206ENST00000484886 EYA2O00167 538 aa23.85■■□□□ 1.41
SNX17-206ENST00000484886 MS4A1P11836 297 aa23.85■■□□□ 1.41
SNX17-206ENST00000484886 APLP1P51693 650 aa23.85■■□□□ 1.41
SNX17-206ENST00000484886 UBE4AQ14139 1066 aa23.85■■□□□ 1.41
SNX17-206ENST00000484886 RSBN1LQ6PCB5 846 aaPredicted RBP23.85■■□□□ 1.41
SNX17-206ENST00000484886 PANK1Q8TE04 598 aa23.85■■□□□ 1.41
SNX17-206ENST00000484886 ADAMTSL1Q8N6G6 1762 aa23.84■■□□□ 1.41
SNX17-206ENST00000484886 SRGAP3O43295 1099 aa23.84■■□□□ 1.41
SNX17-206ENST00000484886 MAP1SQ66K74 1059 aaPredicted RBP23.84■■□□□ 1.41
SNX17-206ENST00000484886 C15orf52Q6ZUT6 534 aaKnown RBP23.84■■□□□ 1.41
SNX17-206ENST00000484886 CD209Q9NNX6 404 aa23.84■■□□□ 1.41
SNX17-206ENST00000484886 AGBL3Q8NEM8 1001 aa23.83■■□□□ 1.41
SNX17-206ENST00000484886 PA2G4Q9UQ80 394 aaKnown RBP23.83■■□□□ 1.41
SNX17-206ENST00000484886 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.4
SNX17-206ENST00000484886 PDE8BO95263 885 aa23.82■■□□□ 1.4
SNX17-206ENST00000484886 GTF2IP78347 998 aa23.82■■□□□ 1.4
SNX17-206ENST00000484886 TBC1D10BQ4KMP7 808 aaPredicted RBP23.82■■□□□ 1.4
SNX17-206ENST00000484886 RBM26Q5T8P6 1007 aaKnown RBP23.82■■□□□ 1.4
SNX17-206ENST00000484886 STRIP1Q5VSL9 837 aa23.82■■□□□ 1.4
SNX17-206ENST00000484886 TTLL5Q6EMB2 1281 aa23.82■■□□□ 1.4
SNX17-206ENST00000484886 SAMD7Q7Z3H4 446 aa23.82■■□□□ 1.4
SNX17-206ENST00000484886 TRPM4Q8TD43 1214 aa23.82■■□□□ 1.4
SNX17-206ENST00000484886 VPS37DQ86XT2 251 aa23.81■■□□□ 1.4
SNX17-206ENST00000484886 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
SNX17-206ENST00000484886 MXD3Q9BW11 206 aa23.81■■□□□ 1.4
SNX17-206ENST00000484886 CIAO1O76071 339 aa23.8■■□□□ 1.4
SNX17-206ENST00000484886 GYG1P46976 350 aa23.8■■□□□ 1.4
SNX17-206ENST00000484886 PUM3Q15397 648 aaKnown RBP23.8■■□□□ 1.4
SNX17-206ENST00000484886 DACT2Q5SW24 774 aa23.8■■□□□ 1.4
SNX17-206ENST00000484886 VGLL2Q8N8G2 317 aa23.8■■□□□ 1.4
SNX17-206ENST00000484886 C1orf115Q9H7X2 142 aa23.8■■□□□ 1.4
SNX17-206ENST00000484886 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
SNX17-206ENST00000484886 IFIT1P09914 478 aaKnown RBP23.79■■□□□ 1.4
SNX17-206ENST00000484886 USP17L8P0C7I0 530 aa23.79■■□□□ 1.4
SNX17-206ENST00000484886 HIBADHP31937 336 aaKnown RBP23.79■■□□□ 1.4
SNX17-206ENST00000484886 MTX1Q13505 466 aa23.79■■□□□ 1.4
SNX17-206ENST00000484886 ATG9AQ7Z3C6 839 aa23.79■■□□□ 1.4
SNX17-206ENST00000484886 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.79■■□□□ 1.4
SNX17-206ENST00000484886 CEP126Q9P2H0 1117 aa23.79■■□□□ 1.4
SNX17-206ENST00000484886 MYO3BQ8WXR4 1341 aa23.79■■□□□ 1.4
SNX17-206ENST00000484886 IL1R1P14778 569 aa23.78■■□□□ 1.4
SNX17-206ENST00000484886 IL15P40933 162 aaPredicted RBP23.78■■□□□ 1.4
SNX17-206ENST00000484886 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
SNX17-206ENST00000484886 CAVIN4Q5BKX8 364 aa23.78■■□□□ 1.4
SNX17-206ENST00000484886 COPRSQ9NQ92 184 aa23.78■■□□□ 1.4
SNX17-206ENST00000484886 ZNF609O15014 1411 aa23.77■■□□□ 1.4
SNX17-206ENST00000484886 SLC5A1P13866 664 aa23.77■■□□□ 1.4
SNX17-206ENST00000484886 HIRAP54198 1017 aaPredicted RBP23.77■■□□□ 1.4
SNX17-206ENST00000484886 HTRA3P83110 453 aa23.77■■□□□ 1.4
SNX17-206ENST00000484886 OGFOD1Q8N543 542 aa23.77■■□□□ 1.4
SNX17-206ENST00000484886 FAM84BQ96KN1 310 aaPredicted RBP23.77■■□□□ 1.4
SNX17-206ENST00000484886 GMLQ99445 158 aa23.77■■□□□ 1.4
SNX17-206ENST00000484886 JAG2Q9Y219 1238 aa23.77■■□□□ 1.4
SNX17-206ENST00000484886 ZBTB7BO15156 539 aaPredicted RBP23.76■■□□□ 1.39
SNX17-206ENST00000484886 FRAT2O75474 233 aaPredicted RBP23.76■■□□□ 1.39
SNX17-206ENST00000484886 EGFRP00533 1210 aa23.76■■□□□ 1.39
SNX17-206ENST00000484886 ZNF646O15015 1829 aaPredicted RBP23.75■■□□□ 1.39
SNX17-206ENST00000484886 PNMA6EA0A0J9YXQ4 647 aa23.75■■□□□ 1.39
SNX17-206ENST00000484886 ITGBL1O95965 494 aaPredicted RBP23.75■■□□□ 1.39
SNX17-206ENST00000484886 ZNF280AP59817 542 aaPredicted RBP23.75■■□□□ 1.39
SNX17-206ENST00000484886 ATP2B3Q16720 1220 aa23.75■■□□□ 1.39
SNX17-206ENST00000484886 KIAA0825Q8IV33 1275 aa23.75■■□□□ 1.39
SNX17-206ENST00000484886 ZC3H15Q8WU90 426 aaKnown RBP23.75■■□□□ 1.39
SNX17-206ENST00000484886 LPIN2Q92539 896 aa23.75■■□□□ 1.39
SNX17-206ENST00000484886 IQSEC3Q9UPP2 1182 aaPredicted RBP23.75■■□□□ 1.39
SNX17-206ENST00000484886 COG6Q9Y2V7 657 aa23.75■■□□□ 1.39
SNX17-206ENST00000484886 MVPQ14764 893 aaKnown RBP23.74■■□□□ 1.39
SNX17-206ENST00000484886 MYOZ2Q9NPC6 264 aa23.74■■□□□ 1.39
SNX17-206ENST00000484886 HDAC9Q9UKV0 1011 aa23.74■■□□□ 1.39
SNX17-206ENST00000484886 PASKQ96RG2 1323 aa23.74■■□□□ 1.39
SNX17-206ENST00000484886 SASH1O94885 1247 aa23.73■■□□□ 1.39
SNX17-206ENST00000484886 FGFR2P21802 821 aa23.73■■□□□ 1.39
SNX17-206ENST00000484886 BCAMP50895 628 aa23.73■■□□□ 1.39
SNX17-206ENST00000484886 FBXO33Q7Z6M2 555 aa23.73■■□□□ 1.39
SNX17-206ENST00000484886 TDRD7Q8NHU6 1098 aaKnown RBP23.73■■□□□ 1.39
SNX17-206ENST00000484886 F8W031 263 aaPredicted RBP23.72■■□□□ 1.39
SNX17-206ENST00000484886 CHAF1AQ13111 956 aaPredicted RBP23.72■■□□□ 1.39
SNX17-206ENST00000484886 G3BP1Q13283 466 aaKnown RBP eCLIP23.72■■□□□ 1.39
SNX17-206ENST00000484886 DCPSQ96C86 337 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms