RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, human

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-208	ENST00000484254	CNOT7	Q9UIV1	285 aa	Known RBP	27.73	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	MROH5	Q6ZUA9	1318 aa		27.72	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	PSME4	Q14997	1843 aa		27.72	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	RFX5	P48382	616 aa	Predicted RBP	27.72	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	TMEM57	Q8N5G2	664 aa		27.72	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	KLHDC4	Q8TBB5	520 aa		27.72	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	LRRC24	Q50LG9	513 aa		27.71	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	USP17L3	A6NCW0	530 aa		27.7	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	USP17L4	A6NCW7	530 aa		27.7	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254		H7C1D1	291 aa		27.7	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	USP17L1	Q7RTZ2	530 aa		27.7	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	MICALL2	Q8IY33	904 aa		27.7	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	ZNF609	O15014	1411 aa		27.69	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	SHTN1	A0MZ66	631 aa		27.69	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	UBE4A	Q14139	1066 aa		27.69	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.69	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	DZIP1L	Q8IYY4	767 aa	Known RBP	27.69	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	PTPN12	Q05209	780 aa	Known RBP	27.68	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	FTSJ3	Q8IY81	847 aa	Known RBP	27.68	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	AGBL3	Q8NEM8	1001 aa		27.68	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	METTL24	Q5JXM2	366 aa		27.67	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	MAP1S	Q66K74	1059 aa	Predicted RBP	27.67	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	CD209	Q9NNX6	404 aa		27.67	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	EYA2	O00167	538 aa		27.66	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	ITGBL1	O95965	494 aa	Predicted RBP	27.66	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	STRIP1	Q5VSL9	837 aa		27.66	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	ZNF804A	Q7Z570	1209 aa		27.66	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	DACT2	Q5SW24	774 aa		27.65	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	CNTROB	Q8N137	903 aa		27.65	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	VGLL2	Q8N8G2	317 aa		27.65	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	GML	Q99445	158 aa		27.65	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	FBXO3	Q9UK99	471 aa		27.65	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	PASK	Q96RG2	1323 aa		27.65	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	PDE8B	O95263	885 aa		27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	GNAI2	P04899	355 aa		27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	RLBP1	P12271	317 aa		27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	HIRA	P54198	1017 aa	Predicted RBP	27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	MTX1	Q13505	466 aa		27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	TRPM4	Q8TD43	1214 aa		27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	RCAN3	Q9UKA8	241 aa		27.64	■■■□□ 2.02
CNTNAP3B-208	ENST00000484254	ZNF646	O15015	1829 aa	Predicted RBP	27.63	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	IL1R1	P14778	569 aa		27.63	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	TTLL5	Q6EMB2	1281 aa		27.63	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	SAMD7	Q7Z3H4	446 aa		27.63	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	FBXW7	Q969H0	707 aa		27.63	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	PGAP2	Q9UHJ9	254 aa		27.63	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	CIAO1	O76071	339 aa		27.62	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	ZNF280A	P59817	542 aa	Predicted RBP	27.62	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	ATG9A	Q7Z3C6	839 aa		27.62	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	ZC3H15	Q8WU90	426 aa	Known RBP	27.62	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	GTF2I	P78347	998 aa		27.61	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.61	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	ITPRIP	Q8IWB1	547 aa		27.61	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	COPRS	Q9NQ92	184 aa		27.61	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	MYO3B	Q8WXR4	1341 aa		27.61	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	SRGAP3	O43295	1099 aa		27.6	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	EGFR	P00533	1210 aa		27.6	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	USP17L8	P0C7I0	530 aa		27.6	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	MXD3	Q9BW11	206 aa		27.6	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	SIL1	Q9H173	461 aa		27.6	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	CEP350	Q5VT06	3117 aa		27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	MS4A1	P11836	297 aa		27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	HIBADH	P31937	336 aa	Known RBP	27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	GYG1	P46976	350 aa		27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	HTRA3	P83110	453 aa		27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	FAM84B	Q96KN1	310 aa	Predicted RBP	27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	PA2G4	Q9UQ80	394 aa	Known RBP	27.59	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	ZBTB7B	O15156	539 aa	Predicted RBP	27.58	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	PUM3	Q15397	648 aa	Known RBP	27.58	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	KIF4B	Q2VIQ3	1234 aa		27.58	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	RBM26	Q5T8P6	1007 aa	Known RBP	27.58	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	PANK1	Q8TE04	598 aa		27.58	■■■□□ 2.01
CNTNAP3B-208	ENST00000484254	FGFR2	P21802	821 aa		27.57	■■■□□ 2
CNTNAP3B-208	ENST00000484254	IL15	P40933	162 aa	Predicted RBP	27.57	■■■□□ 2
CNTNAP3B-208	ENST00000484254	TDRD7	Q8NHU6	1098 aa	Known RBP	27.57	■■■□□ 2
CNTNAP3B-208	ENST00000484254	FBXO33	Q7Z6M2	555 aa		27.56	■■■□□ 2
CNTNAP3B-208	ENST00000484254	DNAJC5G	Q8N7S2	189 aa		27.56	■■■□□ 2
CNTNAP3B-208	ENST00000484254	SASH1	O94885	1247 aa		27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	IFIT1	P09914	478 aa	Known RBP	27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	MMP14	P50281	582 aa		27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	CAVIN4	Q5BKX8	364 aa		27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	MYOZ2	Q9NPC6	264 aa		27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	CREBZF	Q9NS37	354 aa		27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	CEP126	Q9P2H0	1117 aa		27.55	■■■□□ 2
CNTNAP3B-208	ENST00000484254	FKBP1A	P62942	108 aa	Known RBP	27.54	■■■□□ 2
CNTNAP3B-208	ENST00000484254	OGFOD1	Q8N543	542 aa		27.54	■■■□□ 2
CNTNAP3B-208	ENST00000484254	FAM205A	Q6ZU69	1335 aa		27.53	■■■□□ 2
CNTNAP3B-208	ENST00000484254	PNMA6E	A0A0J9YXQ4	647 aa		27.53	■■■□□ 2
CNTNAP3B-208	ENST00000484254	VPS37D	Q86XT2	251 aa		27.53	■■■□□ 2
CNTNAP3B-208	ENST00000484254	LPIN2	Q92539	896 aa		27.53	■■■□□ 2
CNTNAP3B-208	ENST00000484254	TMEM88B	A6NKF7	163 aa		27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	TRAF5	O00463	557 aa		27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	SLC5A1	P13866	664 aa		27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	CDC37L1	Q7L3B6	337 aa		27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	KIAA0825	Q8IV33	1275 aa		27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	CERS5	Q8N5B7	392 aa		27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.52	■■■□□ 2
CNTNAP3B-208	ENST00000484254	ATP8B2	P98198	1209 aa		27.51	■■□□□ 1.99
CNTNAP3B-208	ENST00000484254	C1orf115	Q9H7X2	142 aa		27.51	■■□□□ 1.99
CNTNAP3B-208	ENST00000484254	BCAM	P50895	628 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms