RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 COA1Q9GZY4 146 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 KCNQ5Q9NR82 932 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 FBXO3Q9UK99 471 aa33.23■■■□□ 2.91
SMDT1-203ENST00000484235 SRGAP3O43295 1099 aa33.22■■■□□ 2.91
SMDT1-203ENST00000484235 METTL24Q5JXM2 366 aa33.22■■■□□ 2.91
SMDT1-203ENST00000484235 KLRK1P26718 216 aa33.21■■■□□ 2.91
SMDT1-203ENST00000484235 UBE4AQ14139 1066 aa33.21■■■□□ 2.91
SMDT1-203ENST00000484235 CHADLQ6NUI6 762 aa33.21■■■□□ 2.91
SMDT1-203ENST00000484235 TAF1DQ9H5J8 278 aaPredicted RBP33.21■■■□□ 2.91
SMDT1-203ENST00000484235 COPRSQ9NQ92 184 aa33.21■■■□□ 2.91
SMDT1-203ENST00000484235 PSMD14O00487 310 aa33.2■■■□□ 2.91
SMDT1-203ENST00000484235 LMOD1P29536 600 aaPredicted RBP33.2■■■□□ 2.91
SMDT1-203ENST00000484235 SCNN1DP51172 638 aa33.2■■■□□ 2.91
SMDT1-203ENST00000484235 PDE3AQ14432 1141 aa33.2■■■□□ 2.91
SMDT1-203ENST00000484235 CIAO1O76071 339 aa33.19■■■□□ 2.9
SMDT1-203ENST00000484235 PDE8BO95263 885 aa33.19■■■□□ 2.9
SMDT1-203ENST00000484235 GMPSP49915 693 aaPredicted RBP33.19■■■□□ 2.9
SMDT1-203ENST00000484235 IRS2Q9Y4H2 1338 aa33.19■■■□□ 2.9
SMDT1-203ENST00000484235 EPHX2P34913 555 aa33.18■■■□□ 2.9
SMDT1-203ENST00000484235 MVPQ14764 893 aaKnown RBP33.18■■■□□ 2.9
SMDT1-203ENST00000484235 ATG9AQ7Z3C6 839 aa33.18■■■□□ 2.9
SMDT1-203ENST00000484235 GPRC5DQ9NZD1 345 aa33.18■■■□□ 2.9
SMDT1-203ENST00000484235 VIL1P09327 827 aaKnown RBP33.17■■■□□ 2.9
SMDT1-203ENST00000484235 VGLL2Q8N8G2 317 aa33.17■■■□□ 2.9
SMDT1-203ENST00000484235 SIL1Q9H173 461 aa33.17■■■□□ 2.9
SMDT1-203ENST00000484235 PNMA8AQ86V59 439 aaPredicted RBP33.16■■■□□ 2.9
SMDT1-203ENST00000484235 PA2G4Q9UQ80 394 aaKnown RBP33.16■■■□□ 2.9
SMDT1-203ENST00000484235 COG6Q9Y2V7 657 aa33.16■■■□□ 2.9
SMDT1-203ENST00000484235 SCN4AP35499 1836 aa33.16■■■□□ 2.9
SMDT1-203ENST00000484235 USP17L3A6NCW0 530 aa33.15■■■□□ 2.9
SMDT1-203ENST00000484235 USP17L4A6NCW7 530 aa33.15■■■□□ 2.9
SMDT1-203ENST00000484235 RPS12P25398 132 aaKnown RBP33.15■■■□□ 2.9
SMDT1-203ENST00000484235 EPS15P42566 896 aa33.15■■■□□ 2.9
SMDT1-203ENST00000484235 USP17L1Q7RTZ2 530 aa33.15■■■□□ 2.9
SMDT1-203ENST00000484235 DPF2Q92785 391 aa33.15■■■□□ 2.9
SMDT1-203ENST00000484235 DDX19BQ9UMR2 479 aa33.15■■■□□ 2.9
SMDT1-203ENST00000484235 IL15P40933 162 aaPredicted RBP33.14■■■□□ 2.9
SMDT1-203ENST00000484235 ATP8B2P98198 1209 aa33.14■■■□□ 2.9
SMDT1-203ENST00000484235 ZNF804AQ7Z570 1209 aa33.14■■■□□ 2.9
SMDT1-203ENST00000484235 CD209Q9NNX6 404 aa33.14■■■□□ 2.9
SMDT1-203ENST00000484235 ZBTB12Q9Y330 459 aaPredicted RBP33.14■■■□□ 2.9
SMDT1-203ENST00000484235 PNMA6EA0A0J9YXQ4 647 aa33.13■■■□□ 2.89
SMDT1-203ENST00000484235 HSPA1AP0DMV8 641 aaKnown RBP33.13■■■□□ 2.89
SMDT1-203ENST00000484235 HSPA1BP0DMV9 641 aaKnown RBP33.13■■■□□ 2.89
SMDT1-203ENST00000484235 CHMP4BQ9H444 224 aaKnown RBP33.13■■■□□ 2.89
SMDT1-203ENST00000484235 C1orf115Q9H7X2 142 aa33.13■■■□□ 2.89
SMDT1-203ENST00000484235 CREBZFQ9NS37 354 aa33.13■■■□□ 2.89
SMDT1-203ENST00000484235 C20orf194Q5TEA3 1177 aa33.12■■■□□ 2.89
SMDT1-203ENST00000484235 CEP126Q9P2H0 1117 aa33.12■■■□□ 2.89
SMDT1-203ENST00000484235 CNOT7Q9UIV1 285 aaKnown RBP33.12■■■□□ 2.89
SMDT1-203ENST00000484235 PUM3Q15397 648 aaKnown RBP33.11■■■□□ 2.89
SMDT1-203ENST00000484235 STRIP1Q5VSL9 837 aa33.11■■■□□ 2.89
SMDT1-203ENST00000484235 RSBN1LQ6PCB5 846 aaPredicted RBP33.11■■■□□ 2.89
SMDT1-203ENST00000484235 PASKQ96RG2 1323 aa33.1■■■□□ 2.89
SMDT1-203ENST00000484235 IL1R1P14778 569 aa33.1■■■□□ 2.89
SMDT1-203ENST00000484235 EAPPQ56P03 285 aaPredicted RBP33.1■■■□□ 2.89
SMDT1-203ENST00000484235 USP50Q70EL3 339 aaPredicted RBP33.1■■■□□ 2.89
SMDT1-203ENST00000484235 LDHDQ86WU2 507 aa33.1■■■□□ 2.89
SMDT1-203ENST00000484235 ADARB2Q9NS39 739 aaKnown RBP33.1■■■□□ 2.89
SMDT1-203ENST00000484235 A0A1B0GUL6 1792 aa33.09■■■□□ 2.89
SMDT1-203ENST00000484235 H7C1D1 291 aa33.09■■■□□ 2.89
SMDT1-203ENST00000484235 FGFR2P21802 821 aa33.09■■■□□ 2.89
SMDT1-203ENST00000484235 POLA2Q14181 598 aa33.09■■■□□ 2.89
SMDT1-203ENST00000484235 AGBL3Q8NEM8 1001 aa33.09■■■□□ 2.89
SMDT1-203ENST00000484235 SSH3Q8TE77 659 aa33.09■■■□□ 2.89
SMDT1-203ENST00000484235 FAM84BQ96KN1 310 aaPredicted RBP33.09■■■□□ 2.89
SMDT1-203ENST00000484235 HIBADHP31937 336 aaKnown RBP33.08■■■□□ 2.89
SMDT1-203ENST00000484235 DACT2Q5SW24 774 aa33.08■■■□□ 2.89
SMDT1-203ENST00000484235 TTLL5Q6EMB2 1281 aa33.08■■■□□ 2.89
SMDT1-203ENST00000484235 ZBTB40Q9NUA8 1239 aa33.08■■■□□ 2.89
SMDT1-203ENST00000484235 SCN9AQ15858 1988 aa33.07■■■□□ 2.88
SMDT1-203ENST00000484235 ITGBL1O95965 494 aaPredicted RBP33.07■■■□□ 2.88
SMDT1-203ENST00000484235 IFIT1P09914 478 aaKnown RBP33.07■■■□□ 2.88
SMDT1-203ENST00000484235 GYG1P46976 350 aa33.07■■■□□ 2.88
SMDT1-203ENST00000484235 MICALL2Q8IY33 904 aa33.07■■■□□ 2.88
SMDT1-203ENST00000484235 LPIN2Q92539 896 aa33.07■■■□□ 2.88
SMDT1-203ENST00000484235 CAVIN4Q5BKX8 364 aa33.06■■■□□ 2.88
SMDT1-203ENST00000484235 FBXO33Q7Z6M2 555 aa33.06■■■□□ 2.88
SMDT1-203ENST00000484235 FBXW7Q969H0 707 aa33.06■■■□□ 2.88
SMDT1-203ENST00000484235 GMLQ99445 158 aa33.06■■■□□ 2.88
SMDT1-203ENST00000484235 CLEC11AQ9Y240 323 aa33.06■■■□□ 2.88
SMDT1-203ENST00000484235 ZNF609O15014 1411 aa33.05■■■□□ 2.88
SMDT1-203ENST00000484235 GTF2IP78347 998 aa33.05■■■□□ 2.88
SMDT1-203ENST00000484235 VPS37DQ86XT2 251 aa33.05■■■□□ 2.88
SMDT1-203ENST00000484235 TNS4Q8IZW8 715 aa33.05■■■□□ 2.88
SMDT1-203ENST00000484235 SASH1O94885 1247 aa33.04■■■□□ 2.88
SMDT1-203ENST00000484235 SLC5A1P13866 664 aa33.04■■■□□ 2.88
SMDT1-203ENST00000484235 G3BP1Q13283 466 aaKnown RBP eCLIP33.04■■■□□ 2.88
SMDT1-203ENST00000484235 CEP85Q6P2H3 762 aa33.04■■■□□ 2.88
SMDT1-203ENST00000484235 TDRD7Q8NHU6 1098 aaKnown RBP33.04■■■□□ 2.88
SMDT1-203ENST00000484235 MKRN1Q9UHC7 482 aaKnown RBP33.04■■■□□ 2.88
SMDT1-203ENST00000484235 MYO3BQ8WXR4 1341 aa33.03■■■□□ 2.88
SMDT1-203ENST00000484235 RRP1P56182 461 aaKnown RBP33.03■■■□□ 2.88
SMDT1-203ENST00000484235 SHTN1A0MZ66 631 aa33.02■■■□□ 2.88
SMDT1-203ENST00000484235 ATP2B3Q16720 1220 aa33.02■■■□□ 2.88
SMDT1-203ENST00000484235 USP17L8P0C7I0 530 aa33.01■■■□□ 2.87
SMDT1-203ENST00000484235 MXD3Q9BW11 206 aa33.01■■■□□ 2.87
SMDT1-203ENST00000484235 BCAMP50895 628 aa33■■■□□ 2.87
SMDT1-203ENST00000484235 ZNF280AP59817 542 aaPredicted RBP33■■■□□ 2.87
SMDT1-203ENST00000484235 TFCP2Q12800 502 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms