RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 EGFL6Q8IUX8 553 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 EPC1Q9H2F5 836 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 NFAT5O94916 1531 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 CAVIN2O95810 425 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 SATB1Q01826 763 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 UTYO14607 1347 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 KIF2AO00139 706 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 LEO1Q8WVC0 666 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 FAM227BQ96M60 508 aa13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-205ENST00000483956 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 PSD3Q9NYI0 1048 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 LEKR1Q6ZMV7 388 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 HEG1Q9ULI3 1381 aa13.44□□□□□ -0.26
SEC61A1-205ENST00000483956 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 SUGP1Q8IWZ8 645 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 IP6K1Q92551 441 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 MAP3K2Q9Y2U5 619 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 IVLP07476 585 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 SWT1Q5T5J6 900 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
SEC61A1-205ENST00000483956 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 BTBD11A6QL63 1104 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 H3BQF6 201 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 ATP8B1O43520 1251 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 KCNQ3O43525 872 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 SASH1O94885 1247 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 TDO2P48775 406 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 CC2D1AQ6P1N0 951 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 LARP1Q6PKG0 1096 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 ANXA1P04083 346 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 TEFQ10587 303 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 FAM173BQ6P4H8 233 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 DDX54Q8TDD1 881 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 TMED8Q6PL24 325 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEC61A1-205ENST00000483956 SIPA1L3O60292 1781 aaPredicted RBP13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 MAP2K2P36507 400 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 USPL1Q5W0Q7 1092 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 MMS22LQ6ZRQ5 1243 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 LINS1Q8NG48 757 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 ZSCAN16Q9H4T2 348 aaPredicted RBP13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 MED4Q9NPJ6 270 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 LMTK3Q96Q04 1460 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 GRM8O00222 908 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 TADA3O75528 432 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 CORO7P57737 925 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 KRT32Q14532 448 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 NBPF6Q5VWK0 638 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 MNS1Q8NEH6 495 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 ANKRD20A12PQ8NF67 263 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 MRFAP1L1Q96HT8 127 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 NBPF4Q96M43 638 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 KCND1Q9NSA2 647 aa13.41□□□□□ -0.26
SEC61A1-205ENST00000483956 ATP6V1AP38606 617 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 G3BP1Q13283 466 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 KAZALD1Q96I82 304 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 PGBD1Q96JS3 809 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 FSD1Q9BTV5 496 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 RFX7Q2KHR2 1363 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 GOLGA6L19H0YKK7 550 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 NR1I2O75469 434 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 RESTQ13127 1097 aa13.4□□□□□ -0.26
SEC61A1-205ENST00000483956 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 CARD6Q9BX69 1037 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 CWF19L2Q2TBE0 894 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 CCDC158Q5M9N0 1113 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 BICC1Q9H694 974 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 TAF5LO75529 589 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 EVCP57679 992 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms