RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 SOGA3Q5TF21 947 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 PIM2Q9P1W9 311 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 LEMD3Q9Y2U8 911 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 FPGT-TNNI3KV9GXZ4 949 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 ARAP2Q8WZ64 1704 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 TAF1P21675 1872 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
SHROOM4-204ENST00000483955 BRCA1P38398 1863 aaKnown RBP11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 SMARCA5O60264 1052 aaPredicted RBP11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 KCNJ4P48050 445 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 UBE4AQ14139 1066 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 ATP2B3Q16720 1220 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 AACSQ86V21 672 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 LPIN2Q92539 896 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 ANKIB1Q9P2G1 1089 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 AOX1Q06278 1338 aa11.07□□□□□ -0.64
SHROOM4-204ENST00000483955 KCNA3P22001 575 aa11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 DALRD3Q5D0E6 543 aaKnown RBP11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 EAF2Q96CJ1 260 aaPredicted RBP11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 FHDC1Q9C0D6 1143 aaPredicted RBP11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 GGA1Q9UJY5 639 aa11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 LTBP1Q14766 1721 aa11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
SHROOM4-204ENST00000483955 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 TAF5LO75529 589 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 MX1P20591 662 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 FGFR2P21802 821 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 CCDC93Q567U6 631 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 HELBQ8NG08 1087 aaPredicted RBP11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 NEUROD6Q96NK8 337 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 NSFL1CQ9UNZ2 370 aaKnown RBP11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 ZNF804BA4D1E1 1349 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
SHROOM4-204ENST00000483955 ERC2O15083 957 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 UFL1O94874 794 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 PDE4AP27815 886 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 GPSM2P81274 684 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 CCDC158Q5M9N0 1113 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 DPP8Q6V1X1 898 aaPredicted RBP11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 C15orf52Q6ZUT6 534 aaKnown RBP11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 RTKN2Q8IZC4 609 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 MPNDQ8N594 471 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 SUPT20HQ8NEM7 779 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 EYA3Q99504 573 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 DBNLQ9UJU6 430 aaKnown RBP11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
SHROOM4-204ENST00000483955 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 GLRX3O76003 335 aaKnown RBP11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 RGS3P49796 1198 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 PDE1AP54750 535 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 TIMM10P62072 90 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 CAVIN4Q5BKX8 364 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 NLGN2Q8NFZ4 835 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 C7orf43Q8WVR3 580 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 XAGE2Q96GT9 111 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 DBNDD2Q9BQY9 259 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 ECHDC1Q9NTX5 307 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 DUOX1Q9NRD9 1551 aa11.03□□□□□ -0.64
SHROOM4-204ENST00000483955 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.64
SHROOM4-204ENST00000483955 SNED1Q8TER0 1413 aa11.02□□□□□ -0.64
SHROOM4-204ENST00000483955 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 C21orf2O43822 256 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 VPS37DQ86XT2 251 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 OTUD7AQ8TE49 926 aaPredicted RBP11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 ZNF512BQ96KM6 892 aaPredicted RBP11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 PSMD1Q99460 953 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 SYT17Q9BSW7 474 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 RTFDC1Q9BY42 306 aaPredicted RBP11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 GNL3LQ9NVN8 582 aaKnown RBP11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
SHROOM4-204ENST00000483955 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 ADORA1P30542 326 aa11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 VPS33BQ9H267 617 aa11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 POLLQ9UGP5 575 aa11.01□□□□□ -0.65
SHROOM4-204ENST00000483955 SNAP23O00161 211 aa11□□□□□ -0.65
SHROOM4-204ENST00000483955 SEMA3EO15041 775 aa11□□□□□ -0.65
SHROOM4-204ENST00000483955 PRR29P0C7W0 189 aa11□□□□□ -0.65
SHROOM4-204ENST00000483955 ATP5JP18859 108 aa11□□□□□ -0.65
SHROOM4-204ENST00000483955 HIBADHP31937 336 aaKnown RBP11□□□□□ -0.65
SHROOM4-204ENST00000483955 CLCN6P51797 869 aa11□□□□□ -0.65
SHROOM4-204ENST00000483955 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
SHROOM4-204ENST00000483955 TTC22Q5TAA0 569 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms