RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 SUCLG2Q96I99 432 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 RBM42Q9BTD8 480 aaKnown RBP6.63□□□□□ -1.35
COL17A1-206ENST00000483876 C22orf23Q9BZE7 217 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 CWC25Q9NXE8 425 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-206ENST00000483876 FBXO3Q9UK99 471 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 VCANP13611 3396 aa6.63□□□□□ -1.35
COL17A1-206ENST00000483876 TRPM7Q96QT4 1865 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 DLEC1Q9Y238 1755 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 CARMIL3Q8ND23 1372 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 TMEM265A0A087WTH1 108 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 GPR25O00155 361 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 SMARCA5O60264 1052 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-206ENST00000483876 ZPR1O75312 459 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 GSPT1P15170 499 aaKnown RBP6.62□□□□□ -1.35
COL17A1-206ENST00000483876 SDSP20132 328 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 SCNN1DP51172 638 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 NFIXQ14938 502 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 GPR153Q6NV75 609 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 KIF6Q6ZMV9 814 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 TBC1D9Q6ZT07 1266 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 REM2Q8IYK8 340 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-206ENST00000483876 DPF3Q92784 378 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 SLC4A9Q96Q91 983 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 TMEM106CQ9BVX2 250 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 PLA2G12BQ9BX93 195 aa6.62□□□□□ -1.35
COL17A1-206ENST00000483876 BICC1Q9H694 974 aaKnown RBP6.62□□□□□ -1.35
COL17A1-206ENST00000483876 ZNF277Q9NRM2 450 aaPredicted RBP6.62□□□□□ -1.35
COL17A1-206ENST00000483876 RANBP2P49792 3224 aaKnown RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 BRCA2P51587 3418 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 MAP3K15Q6ZN16 1313 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 ERC2O15083 957 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 REC8O95072 547 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 PCCAP05165 728 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 PDE6BP35913 854 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 RFX5P48382 616 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 EIF5P55010 431 aaKnown RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 FOXO4P98177 505 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 FKBP4Q02790 459 aaKnown RBP eCLIP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 MAP3K12Q12852 859 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 BECN1Q14457 450 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 PRPF40BQ6NWY9 871 aaKnown RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 OTUD7AQ8TE49 926 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 CNKSR1Q969H4 720 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 GPR108Q9NPR9 543 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 MTMR10Q9NXD2 777 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 DAXXQ9UER7 740 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-206ENST00000483876 ITGB4P16144 1822 aa6.61□□□□□ -1.35
COL17A1-206ENST00000483876 PAPPA2Q9BXP8 1791 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 CDHR2Q9BYE9 1310 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 APBB1O00213 710 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 PPEF1O14829 653 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 FKTNO75072 461 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 GLRX3O76003 335 aaKnown RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 CIAO1O76071 339 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 SASH1O94885 1247 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 CSF1RP07333 972 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 SLC10A3P09131 477 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 EIF6P56537 245 aaKnown RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 PTPN12Q05209 780 aaKnown RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 OS9Q13438 667 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 CCDC93Q567U6 631 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 INTS5Q6P9B9 1019 aaKnown RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 CLEC4GQ6UXB4 293 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 CDC37L1Q7L3B6 337 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 UBE3BQ7Z3V4 1068 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 JDP2Q8WYK2 163 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 SYMPKQ92797 1274 aaKnown RBP6.6□□□□□ -1.35
COL17A1-206ENST00000483876 SNX21Q969T3 373 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 GPATCH3Q96I76 525 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 USP26Q9BXU7 913 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 ECHDC1Q9NTX5 307 aa6.6□□□□□ -1.35
COL17A1-206ENST00000483876 ZNF831Q5JPB2 1677 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 IFIT2P09913 472 aaKnown RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 IL15P40933 162 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 IARSP41252 1262 aaKnown RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 CRKLP46109 303 aaKnown RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 PIP4K2AP48426 406 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 MFAP1P55081 439 aaKnown RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 EPHA10Q5JZY3 1008 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 LMBR1LQ6UX01 489 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 ZNF34Q8IZ26 560 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 C2orf69Q8N8R5 385 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 PI4K2BQ8TCG2 481 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 IL17RAQ96F46 866 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 ZBTB3Q9H5J0 574 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 IL1RAPL2Q9NP60 686 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 ADARB2Q9NS39 739 aaKnown RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 RNF216Q9NWF9 866 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-206ENST00000483876 TRIM17Q9Y577 477 aa6.59□□□□□ -1.35
COL17A1-206ENST00000483876 TNFRSF10AO00220 468 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 CHMLP26374 656 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 PARP10Q53GL7 1025 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms