RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 ZBTB12Q9Y330 459 aaPredicted RBP33.05■■■□□ 2.88
GTF3C4-202ENST00000483873 POTEIP0CG38 1075 aa33.04■■■□□ 2.88
GTF3C4-202ENST00000483873 POTEJP0CG39 1038 aa33.04■■■□□ 2.88
GTF3C4-202ENST00000483873 C20orf194Q5TEA3 1177 aa33.04■■■□□ 2.88
GTF3C4-202ENST00000483873 ATG9AQ7Z3C6 839 aa33.04■■■□□ 2.88
GTF3C4-202ENST00000483873 COG6Q9Y2V7 657 aa33.04■■■□□ 2.88
GTF3C4-202ENST00000483873 EPHX2P34913 555 aa33.03■■■□□ 2.88
GTF3C4-202ENST00000483873 EPS15P42566 896 aa33.03■■■□□ 2.88
GTF3C4-202ENST00000483873 C15orf52Q6ZUT6 534 aaKnown RBP33.03■■■□□ 2.88
GTF3C4-202ENST00000483873 PNMA6EA0A0J9YXQ4 647 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 LMOD1P29536 600 aaPredicted RBP33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 MVPQ14764 893 aaKnown RBP33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 PODNQ7Z5L7 613 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 RBM46Q8TBY0 533 aaKnown RBP33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 COA1Q9GZY4 146 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 ADAMTSL1Q8N6G6 1762 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 UBE4AQ14139 1066 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 COPRSQ9NQ92 184 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 GPRC5DQ9NZD1 345 aa33.02■■■□□ 2.88
GTF3C4-202ENST00000483873 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.01■■■□□ 2.87
GTF3C4-202ENST00000483873 SHTN1A0MZ66 631 aa33■■■□□ 2.87
GTF3C4-202ENST00000483873 PDE8BO95263 885 aa33■■■□□ 2.87
GTF3C4-202ENST00000483873 CEP350Q5VT06 3117 aa33■■■□□ 2.87
GTF3C4-202ENST00000483873 CIAO1O76071 339 aa32.99■■■□□ 2.87
GTF3C4-202ENST00000483873 VIL1P09327 827 aaKnown RBP32.99■■■□□ 2.87
GTF3C4-202ENST00000483873 EAPPQ56P03 285 aaPredicted RBP32.99■■■□□ 2.87
GTF3C4-202ENST00000483873 CD209Q9NNX6 404 aa32.98■■■□□ 2.87
GTF3C4-202ENST00000483873 FBXO3Q9UK99 471 aa32.98■■■□□ 2.87
GTF3C4-202ENST00000483873 USP17L3A6NCW0 530 aa32.96■■■□□ 2.87
GTF3C4-202ENST00000483873 USP17L4A6NCW7 530 aa32.96■■■□□ 2.87
GTF3C4-202ENST00000483873 PDE3AQ14432 1141 aa32.96■■■□□ 2.87
GTF3C4-202ENST00000483873 USP17L1Q7RTZ2 530 aa32.96■■■□□ 2.87
GTF3C4-202ENST00000483873 ZNF804AQ7Z570 1209 aa32.96■■■□□ 2.87
GTF3C4-202ENST00000483873 GYG1P46976 350 aa32.95■■■□□ 2.87
GTF3C4-202ENST00000483873 RSBN1LQ6PCB5 846 aaPredicted RBP32.95■■■□□ 2.87
GTF3C4-202ENST00000483873 FBXW7Q969H0 707 aa32.95■■■□□ 2.87
GTF3C4-202ENST00000483873 CNOT7Q9UIV1 285 aaKnown RBP32.95■■■□□ 2.87
GTF3C4-202ENST00000483873 DDX19BQ9UMR2 479 aa32.95■■■□□ 2.87
GTF3C4-202ENST00000483873 ATP8B2P98198 1209 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 SMC1BQ8NDV3 1235 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 MXD3Q9BW11 206 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 HSPA6P17066 643 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 FGFR2P21802 821 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 RPS12P25398 132 aaKnown RBP32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 IL15P40933 162 aaPredicted RBP32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 POLA2Q14181 598 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 PUM3Q15397 648 aaKnown RBP32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 MICALL2Q8IY33 904 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 DPF2Q92785 391 aa32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 FAM84BQ96KN1 310 aaPredicted RBP32.94■■■□□ 2.86
GTF3C4-202ENST00000483873 ZNF609O15014 1411 aa32.93■■■□□ 2.86
GTF3C4-202ENST00000483873 DACT2Q5SW24 774 aa32.93■■■□□ 2.86
GTF3C4-202ENST00000483873 PNMA8AQ86V59 439 aaPredicted RBP32.93■■■□□ 2.86
GTF3C4-202ENST00000483873 ADARB2Q9NS39 739 aaKnown RBP32.93■■■□□ 2.86
GTF3C4-202ENST00000483873 IL1R1P14778 569 aa32.92■■■□□ 2.86
GTF3C4-202ENST00000483873 GTF2IP78347 998 aa32.92■■■□□ 2.86
GTF3C4-202ENST00000483873 FSTL1Q12841 308 aa32.92■■■□□ 2.86
GTF3C4-202ENST00000483873 LDHDQ86WU2 507 aa32.92■■■□□ 2.86
GTF3C4-202ENST00000483873 SSH3Q8TE77 659 aa32.92■■■□□ 2.86
GTF3C4-202ENST00000483873 CEP126Q9P2H0 1117 aa32.92■■■□□ 2.86
GTF3C4-202ENST00000483873 ARAP2Q8WZ64 1704 aa32.91■■■□□ 2.86
GTF3C4-202ENST00000483873 RRP1P56182 461 aaKnown RBP32.91■■■□□ 2.86
GTF3C4-202ENST00000483873 STRIP1Q5VSL9 837 aa32.91■■■□□ 2.86
GTF3C4-202ENST00000483873 CEP85Q6P2H3 762 aa32.91■■■□□ 2.86
GTF3C4-202ENST00000483873 HIBADHP31937 336 aaKnown RBP32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 TTLL5Q6EMB2 1281 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 CHADLQ6NUI6 762 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 TRPM4Q8TD43 1214 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 GMLQ99445 158 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 ZBTB40Q9NUA8 1239 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 CLEC11AQ9Y240 323 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 MYH13Q9UKX3 1938 aa32.9■■■□□ 2.86
GTF3C4-202ENST00000483873 USP50Q70EL3 339 aaPredicted RBP32.89■■■□□ 2.86
GTF3C4-202ENST00000483873 AGBL3Q8NEM8 1001 aa32.89■■■□□ 2.86
GTF3C4-202ENST00000483873 H7C1D1 291 aa32.88■■■□□ 2.85
GTF3C4-202ENST00000483873 FBXO33Q7Z6M2 555 aa32.88■■■□□ 2.85
GTF3C4-202ENST00000483873 JAG2Q9Y219 1238 aa32.88■■■□□ 2.85
GTF3C4-202ENST00000483873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.88■■■□□ 2.85
GTF3C4-202ENST00000483873 EGFRP00533 1210 aa32.87■■■□□ 2.85
GTF3C4-202ENST00000483873 IFIT1P09914 478 aaKnown RBP32.87■■■□□ 2.85
GTF3C4-202ENST00000483873 SLC5A1P13866 664 aa32.87■■■□□ 2.85
GTF3C4-202ENST00000483873 ATP2B3Q16720 1220 aa32.87■■■□□ 2.85
GTF3C4-202ENST00000483873 SAMD7Q7Z3H4 446 aa32.87■■■□□ 2.85
GTF3C4-202ENST00000483873 LPIN2Q92539 896 aa32.87■■■□□ 2.85
GTF3C4-202ENST00000483873 HIRAP54198 1017 aaPredicted RBP32.86■■■□□ 2.85
GTF3C4-202ENST00000483873 TFCP2Q12800 502 aa32.86■■■□□ 2.85
GTF3C4-202ENST00000483873 TDRD7Q8NHU6 1098 aaKnown RBP32.86■■■□□ 2.85
GTF3C4-202ENST00000483873 BCAMP50895 628 aa32.85■■■□□ 2.85
GTF3C4-202ENST00000483873 TBC1D10BQ4KMP7 808 aaPredicted RBP32.85■■■□□ 2.85
GTF3C4-202ENST00000483873 IQSEC3Q9UPP2 1182 aaPredicted RBP32.85■■■□□ 2.85
GTF3C4-202ENST00000483873 CAVIN4Q5BKX8 364 aa32.85■■■□□ 2.85
GTF3C4-202ENST00000483873 VPS37DQ86XT2 251 aa32.85■■■□□ 2.85
GTF3C4-202ENST00000483873 G3BP1Q13283 466 aaKnown RBP eCLIP32.84■■■□□ 2.85
GTF3C4-202ENST00000483873 MAP1SQ66K74 1059 aaPredicted RBP32.84■■■□□ 2.85
GTF3C4-202ENST00000483873 CERS5Q8N5B7 392 aa32.84■■■□□ 2.85
GTF3C4-202ENST00000483873 RBM26Q5T8P6 1007 aaKnown RBP32.83■■■□□ 2.85
GTF3C4-202ENST00000483873 MYO3BQ8WXR4 1341 aa32.82■■■□□ 2.84
GTF3C4-202ENST00000483873 SASH1O94885 1247 aa32.82■■■□□ 2.84
GTF3C4-202ENST00000483873 USP17L8P0C7I0 530 aa32.82■■■□□ 2.84
GTF3C4-202ENST00000483873 ZNF280AP59817 542 aaPredicted RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms