RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 HELLSQ9NRZ9 838 aa16.16■□□□□ 0.18
RXRB-205ENST00000483821 LEMD3Q9Y2U8 911 aa16.16■□□□□ 0.18
RXRB-205ENST00000483821 SPEF2Q9C093 1822 aa16.16■□□□□ 0.18
RXRB-205ENST00000483821 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
RXRB-205ENST00000483821 MCMDC2Q4G0Z9 681 aa16.15■□□□□ 0.18
RXRB-205ENST00000483821 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
RXRB-205ENST00000483821 SEMA3EO15041 775 aa16.14■□□□□ 0.17
RXRB-205ENST00000483821 NPR1P16066 1061 aa16.14■□□□□ 0.17
RXRB-205ENST00000483821 PHKA1P46020 1223 aa16.14■□□□□ 0.17
RXRB-205ENST00000483821 SPATA5Q8NB90 893 aa16.14■□□□□ 0.17
RXRB-205ENST00000483821 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
RXRB-205ENST00000483821 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
RXRB-205ENST00000483821 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
RXRB-205ENST00000483821 XDHP47989 1333 aa16.14■□□□□ 0.17
RXRB-205ENST00000483821 ZBTB22O15209 634 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 MCAMP43121 646 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 ZAP70P43403 619 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 DEFB132Q7Z7B7 95 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 SNX21Q969T3 373 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 LSG1Q9H089 658 aaKnown RBP16.13■□□□□ 0.17
RXRB-205ENST00000483821 ZNF804BA4D1E1 1349 aa16.13■□□□□ 0.17
RXRB-205ENST00000483821 HSPA4P34932 840 aa16.12■□□□□ 0.17
RXRB-205ENST00000483821 ZMYM1Q5SVZ6 1142 aa16.12■□□□□ 0.17
RXRB-205ENST00000483821 RNF20Q5VTR2 975 aa16.12■□□□□ 0.17
RXRB-205ENST00000483821 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
RXRB-205ENST00000483821 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
RXRB-205ENST00000483821 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
RXRB-205ENST00000483821 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 IGSF3O75054 1194 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
RXRB-205ENST00000483821 ATP2B4P23634 1241 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 HIBADHP31937 336 aaKnown RBP16.11■□□□□ 0.17
RXRB-205ENST00000483821 BCAMP50895 628 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 MAP3K12Q12852 859 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 SCARF1Q14162 830 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 FBXO33Q7Z6M2 555 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 HMG20BQ9P0W2 317 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 NDUFB9Q9Y6M9 179 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
RXRB-205ENST00000483821 ST18O60284 1047 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 SRGNP10124 158 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
RXRB-205ENST00000483821 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
RXRB-205ENST00000483821 MAP4K1Q92918 833 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 KIF2CQ99661 725 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
RXRB-205ENST00000483821 QSER1Q2KHR3 1735 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 ARAP2Q8WZ64 1704 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 MED23Q9ULK4 1368 aa16.1■□□□□ 0.17
RXRB-205ENST00000483821 TNRC6CQ9HCJ0 1690 aaKnown RBP16.09■□□□□ 0.17
RXRB-205ENST00000483821 H0YIN7 160 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 FRAT2O75474 233 aaPredicted RBP16.09■□□□□ 0.17
RXRB-205ENST00000483821 CYP2E1P05181 493 aaPredicted RBP16.09■□□□□ 0.17
RXRB-205ENST00000483821 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 STYK1Q6J9G0 422 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 APPBP2Q92624 585 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 FAM84BQ96KN1 310 aaPredicted RBP16.09■□□□□ 0.17
RXRB-205ENST00000483821 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 GGA1Q9UJY5 639 aa16.09■□□□□ 0.17
RXRB-205ENST00000483821 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
RXRB-205ENST00000483821 NRXN2Q9P2S2 1712 aa16.08■□□□□ 0.17
RXRB-205ENST00000483821 SNAP23O00161 211 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
RXRB-205ENST00000483821 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.16
RXRB-205ENST00000483821 GYG1P46976 350 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 MCM2P49736 904 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 ATP6V0A2Q9Y487 856 aa16.08■□□□□ 0.16
RXRB-205ENST00000483821 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 KCNB2Q92953 911 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 DSCC1Q9BVC3 393 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 IL25Q9H293 177 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 PIH1D3Q9NQM4 214 aaKnown RBP16.07■□□□□ 0.16
RXRB-205ENST00000483821 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
RXRB-205ENST00000483821 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
RXRB-205ENST00000483821 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
RXRB-205ENST00000483821 PSMA5P28066 241 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 ADD2P35612 726 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 GPSM2P81274 684 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 PTH1RQ03431 593 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 NECTIN1Q15223 517 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
RXRB-205ENST00000483821 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
RXRB-205ENST00000483821 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
RXRB-205ENST00000483821 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
RXRB-205ENST00000483821 UFL1O94874 794 aa16.05■□□□□ 0.16
RXRB-205ENST00000483821 PDE6AP16499 860 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms