RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 PIM2Q9P1W9 311 aa23.2■■□□□ 1.3
PCCB-216ENST00000483687 GGA1Q9UJY5 639 aa23.2■■□□□ 1.3
PCCB-216ENST00000483687 BRCA1P38398 1863 aaKnown RBP23.2■■□□□ 1.3
PCCB-216ENST00000483687 LTBP1Q14766 1721 aa23.2■■□□□ 1.3
PCCB-216ENST00000483687 TTC39AQ5SRH9 613 aa23.19■■□□□ 1.3
PCCB-216ENST00000483687 ZNF219Q9P2Y4 722 aaPredicted RBP23.19■■□□□ 1.3
PCCB-216ENST00000483687 UFL1O94874 794 aa23.19■■□□□ 1.3
PCCB-216ENST00000483687 ATP5JP18859 108 aa23.19■■□□□ 1.3
PCCB-216ENST00000483687 ATP2B4P23634 1241 aa23.19■■□□□ 1.3
PCCB-216ENST00000483687 CCDC102BQ68D86 513 aa23.18■■□□□ 1.3
PCCB-216ENST00000483687 MPNDQ8N594 471 aa23.18■■□□□ 1.3
PCCB-216ENST00000483687 BOLA2Q9H3K6 86 aa23.18■■□□□ 1.3
PCCB-216ENST00000483687 AK9Q5TCS8 1911 aa23.17■■□□□ 1.3
PCCB-216ENST00000483687 TRIM6-TRIM34B2RNG4 842 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 KLRK1P26718 216 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 PHKA1P46020 1223 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 CAVIN4Q5BKX8 364 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
PCCB-216ENST00000483687 TBC1D16Q8TBP0 767 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 C7orf43Q8WVR3 580 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 SRCAPQ6ZRS2 3230 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 C21orf2O43822 256 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 GYG1P46976 350 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 BCAMP50895 628 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 POLLQ9UGP5 575 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 WWC3Q9ULE0 1092 aa23.16■■□□□ 1.3
PCCB-216ENST00000483687 MAP4K4O95819 1239 aaPredicted RBP23.15■■□□□ 1.3
PCCB-216ENST00000483687 DALRD3Q5D0E6 543 aaKnown RBP23.15■■□□□ 1.3
PCCB-216ENST00000483687 CC2D2BQ6DHV5 1058 aa23.15■■□□□ 1.3
PCCB-216ENST00000483687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.15■■□□□ 1.3
PCCB-216ENST00000483687 DUOX1Q9NRD9 1551 aa23.14■■□□□ 1.3
PCCB-216ENST00000483687 SDSP20132 328 aa23.14■■□□□ 1.3
PCCB-216ENST00000483687 NLGN2Q8NFZ4 835 aa23.14■■□□□ 1.3
PCCB-216ENST00000483687 ZNF512BQ96KM6 892 aaPredicted RBP23.14■■□□□ 1.3
PCCB-216ENST00000483687 FAM84BQ96KN1 310 aaPredicted RBP23.14■■□□□ 1.3
PCCB-216ENST00000483687 GPR101Q96P66 508 aaPredicted RBP23.14■■□□□ 1.3
PCCB-216ENST00000483687 UQCRFS1P1P0C7P4 283 aa23.13■■□□□ 1.29
PCCB-216ENST00000483687 ARID4AP29374 1257 aaPredicted RBP23.13■■□□□ 1.29
PCCB-216ENST00000483687 RILPL2Q969X0 211 aa23.13■■□□□ 1.29
PCCB-216ENST00000483687 DNAJC2Q99543 621 aaKnown RBP23.13■■□□□ 1.29
PCCB-216ENST00000483687 FHDC1Q9C0D6 1143 aaPredicted RBP23.13■■□□□ 1.29
PCCB-216ENST00000483687 IRS2Q9Y4H2 1338 aa23.13■■□□□ 1.29
PCCB-216ENST00000483687 TXNRD3Q86VQ6 643 aa23.13■■□□□ 1.29
PCCB-216ENST00000483687 HAUS7Q99871 368 aa23.13■■□□□ 1.29
PCCB-216ENST00000483687 AKAP11Q9UKA4 1901 aa23.13■■□□□ 1.29
PCCB-216ENST00000483687 MCAMP43121 646 aa23.12■■□□□ 1.29
PCCB-216ENST00000483687 CNTROBQ8N137 903 aa23.12■■□□□ 1.29
PCCB-216ENST00000483687 GNL3LQ9NVN8 582 aaKnown RBP23.12■■□□□ 1.29
PCCB-216ENST00000483687 NDUFB9Q9Y6M9 179 aa23.12■■□□□ 1.29
PCCB-216ENST00000483687 HIBADHP31937 336 aaKnown RBP23.11■■□□□ 1.29
PCCB-216ENST00000483687 SCARF1Q14162 830 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 CCDC93Q567U6 631 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 C15orf52Q6ZUT6 534 aaKnown RBP23.11■■□□□ 1.29
PCCB-216ENST00000483687 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 MYH13Q9UKX3 1938 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 MED23Q9ULK4 1368 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
PCCB-216ENST00000483687 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
PCCB-216ENST00000483687 FKBP4Q02790 459 aaKnown RBP eCLIP23.1■■□□□ 1.29
PCCB-216ENST00000483687 ZNF804AQ7Z570 1209 aa23.1■■□□□ 1.29
PCCB-216ENST00000483687 EVI5LQ96CN4 794 aa23.1■■□□□ 1.29
PCCB-216ENST00000483687 SNRKQ9NRH2 765 aa23.1■■□□□ 1.29
PCCB-216ENST00000483687 BCS1LQ9Y276 419 aa23.1■■□□□ 1.29
PCCB-216ENST00000483687 RASGRF1Q13972 1273 aa23.09■■□□□ 1.29
PCCB-216ENST00000483687 PI16Q6UXB8 463 aa23.09■■□□□ 1.29
PCCB-216ENST00000483687 RTKN2Q8IZC4 609 aa23.09■■□□□ 1.29
PCCB-216ENST00000483687 EDC3Q96F86 508 aaKnown RBP23.09■■□□□ 1.29
PCCB-216ENST00000483687 EYA3Q99504 573 aa23.09■■□□□ 1.29
PCCB-216ENST00000483687 PAG1Q9NWQ8 432 aa23.09■■□□□ 1.29
PCCB-216ENST00000483687 IQSEC3Q9UPP2 1182 aaPredicted RBP23.09■■□□□ 1.29
PCCB-216ENST00000483687 GOLIM4O00461 696 aa23.08■■□□□ 1.29
PCCB-216ENST00000483687 RIMBP2O15034 1052 aa23.08■■□□□ 1.29
PCCB-216ENST00000483687 RTFDC1Q9BY42 306 aaPredicted RBP23.08■■□□□ 1.29
PCCB-216ENST00000483687 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
PCCB-216ENST00000483687 FRAT2O75474 233 aaPredicted RBP23.08■■□□□ 1.28
PCCB-216ENST00000483687 ZAP70P43403 619 aa23.08■■□□□ 1.28
PCCB-216ENST00000483687 WASHC4Q2M389 1173 aa23.08■■□□□ 1.28
PCCB-216ENST00000483687 SPATA5Q8NB90 893 aa23.08■■□□□ 1.28
PCCB-216ENST00000483687 HMG20BQ9P0W2 317 aa23.08■■□□□ 1.28
PCCB-216ENST00000483687 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
PCCB-216ENST00000483687 ARFGEF1Q9Y6D6 1849 aa23.06■■□□□ 1.28
PCCB-216ENST00000483687 CDC45O75419 566 aa23.06■■□□□ 1.28
PCCB-216ENST00000483687 C8orf34Q49A92 452 aa23.06■■□□□ 1.28
PCCB-216ENST00000483687 SUPT20HQ8NEM7 779 aa23.06■■□□□ 1.28
PCCB-216ENST00000483687 SEMA3EO15041 775 aa23.05■■□□□ 1.28
PCCB-216ENST00000483687 FSD1Q9BTV5 496 aa23.05■■□□□ 1.28
PCCB-216ENST00000483687 DENND2AQ9ULE3 1009 aa23.05■■□□□ 1.28
PCCB-216ENST00000483687 PSMD1Q99460 953 aa23.05■■□□□ 1.28
PCCB-216ENST00000483687 ANTXR1Q9H6X2 564 aa23.05■■□□□ 1.28
PCCB-216ENST00000483687 CD209Q9NNX6 404 aa23.05■■□□□ 1.28
PCCB-216ENST00000483687 FER1L6Q2WGJ9 1857 aa23.04■■□□□ 1.28
PCCB-216ENST00000483687 COL1A1P02452 1464 aaPredicted RBP23.04■■□□□ 1.28
PCCB-216ENST00000483687 CYP2E1P05181 493 aaPredicted RBP23.03■■□□□ 1.28
PCCB-216ENST00000483687 TTF1Q15361 905 aaPredicted RBP23.03■■□□□ 1.28
PCCB-216ENST00000483687 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
PCCB-216ENST00000483687 KBTBD3Q8NAB2 608 aa23.03■■□□□ 1.28
PCCB-216ENST00000483687 TDRD7Q8NHU6 1098 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms