RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 SNAP23O00161 211 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 TAF5LO75529 589 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 AGBL3Q8NEM8 1001 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 SSH1Q8WYL5 1049 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-207ENST00000483128 MXD3Q9BW11 206 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 TLL2Q9Y6L7 1015 aa17.78■□□□□ 0.44
SHANK1-207ENST00000483128 POLR2AP24928 1970 aaKnown RBP17.78■□□□□ 0.44
SHANK1-207ENST00000483128 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.44
SHANK1-207ENST00000483128 TAF7LQ5H9L4 462 aa17.77■□□□□ 0.44
SHANK1-207ENST00000483128 CYP4F22Q6NT55 531 aa17.77■□□□□ 0.44
SHANK1-207ENST00000483128 KRT26Q7Z3Y9 468 aa17.77■□□□□ 0.44
SHANK1-207ENST00000483128 DCPSQ96C86 337 aaKnown RBP17.77■□□□□ 0.44
SHANK1-207ENST00000483128 COA1Q9GZY4 146 aa17.77■□□□□ 0.44
SHANK1-207ENST00000483128 ASTN2O75129 1339 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-207ENST00000483128 ADM5C9JUS6 153 aa17.76■□□□□ 0.43
SHANK1-207ENST00000483128 NBPF7P0C2Y1 421 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-207ENST00000483128 USP17L8P0C7I0 530 aa17.76■□□□□ 0.43
SHANK1-207ENST00000483128 CAPNS2Q96L46 248 aa17.76■□□□□ 0.43
SHANK1-207ENST00000483128 GMLQ99445 158 aa17.76■□□□□ 0.43
SHANK1-207ENST00000483128 PSME4Q14997 1843 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 FOXN1O15353 648 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 PLIN1O60240 522 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 ZNF280AP59817 542 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-207ENST00000483128 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 SAPCD2Q86UD0 394 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 AIDAQ96BJ3 306 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 SUCLG2Q96I99 432 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 GGA3Q9NZ52 723 aa17.75■□□□□ 0.43
SHANK1-207ENST00000483128 ECE1P42892 770 aa17.74■□□□□ 0.43
SHANK1-207ENST00000483128 SCARF1Q14162 830 aa17.74■□□□□ 0.43
SHANK1-207ENST00000483128 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
SHANK1-207ENST00000483128 MYOZ2Q9NPC6 264 aa17.74■□□□□ 0.43
SHANK1-207ENST00000483128 CNNM1Q9NRU3 951 aa17.74■□□□□ 0.43
SHANK1-207ENST00000483128 PTPRCP08575 1304 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 STRIP1Q5VSL9 837 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 ANGEL2Q5VTE6 544 aaKnown RBP17.73■□□□□ 0.43
SHANK1-207ENST00000483128 TTLL5Q6EMB2 1281 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 SULF1Q8IWU6 871 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 SMC4Q9NTJ3 1288 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 WBP1LQ9NX94 342 aa17.73■□□□□ 0.43
SHANK1-207ENST00000483128 AOC2O75106 756 aa17.72■□□□□ 0.43
SHANK1-207ENST00000483128 GTF2IP78347 998 aa17.72■□□□□ 0.43
SHANK1-207ENST00000483128 TRMT2AQ8IZ69 625 aaKnown RBP17.72■□□□□ 0.43
SHANK1-207ENST00000483128 TNS4Q8IZW8 715 aa17.72■□□□□ 0.43
SHANK1-207ENST00000483128 BICC1Q9H694 974 aaKnown RBP17.72■□□□□ 0.43
SHANK1-207ENST00000483128 CD209Q9NNX6 404 aa17.72■□□□□ 0.43
SHANK1-207ENST00000483128 SCAF8Q9UPN6 1271 aaKnown RBP17.72■□□□□ 0.43
SHANK1-207ENST00000483128 ZNF609O15014 1411 aa17.72■□□□□ 0.43
SHANK1-207ENST00000483128 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
SHANK1-207ENST00000483128 ALDH1L2Q3SY69 923 aa17.71■□□□□ 0.43
SHANK1-207ENST00000483128 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
SHANK1-207ENST00000483128 UTYO14607 1347 aa17.71■□□□□ 0.42
SHANK1-207ENST00000483128 HUNKP57058 714 aa17.7■□□□□ 0.42
SHANK1-207ENST00000483128 KIAA0825Q8IV33 1275 aa17.7■□□□□ 0.42
SHANK1-207ENST00000483128 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
SHANK1-207ENST00000483128 GBA2Q9HCG7 927 aaPredicted RBP17.7■□□□□ 0.42
SHANK1-207ENST00000483128 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
SHANK1-207ENST00000483128 IRS2Q9Y4H2 1338 aa17.7■□□□□ 0.42
SHANK1-207ENST00000483128 CTCFP49711 727 aaPredicted RBP17.69■□□□□ 0.42
SHANK1-207ENST00000483128 NBPF9Q3BBW0 867 aa17.69■□□□□ 0.42
SHANK1-207ENST00000483128 C2orf69Q8N8R5 385 aa17.69■□□□□ 0.42
SHANK1-207ENST00000483128 LBX1P52954 281 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 C15orf52Q6ZUT6 534 aaKnown RBP17.68■□□□□ 0.42
SHANK1-207ENST00000483128 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 CDCA5Q96FF9 252 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 HHIPL1Q96JK4 782 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 JAG2Q9Y219 1238 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
SHANK1-207ENST00000483128 ZNF646O15015 1829 aaPredicted RBP17.68■□□□□ 0.42
SHANK1-207ENST00000483128 RABL6Q3YEC7 729 aaPredicted RBP17.67■□□□□ 0.42
SHANK1-207ENST00000483128 BEGAINQ9BUH8 593 aa17.67■□□□□ 0.42
SHANK1-207ENST00000483128 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
SHANK1-207ENST00000483128 WNT10BO00744 389 aa17.66■□□□□ 0.42
SHANK1-207ENST00000483128 SASH1O94885 1247 aa17.66■□□□□ 0.42
SHANK1-207ENST00000483128 MAP2K2P36507 400 aa17.66■□□□□ 0.42
SHANK1-207ENST00000483128 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
SHANK1-207ENST00000483128 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
SHANK1-207ENST00000483128 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
SHANK1-207ENST00000483128 F8W031 263 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-207ENST00000483128 CAPN15O75808 1086 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-207ENST00000483128 IL1R1P14778 569 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 LRRC24Q50LG9 513 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 MIER1Q8N108 512 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 CERS5Q8N5B7 392 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 PRDM10Q9NQV6 1147 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 PITPNM2Q9BZ72 1349 aa17.65■□□□□ 0.42
SHANK1-207ENST00000483128 HSPA8P11142 646 aaKnown RBP17.64■□□□□ 0.41
SHANK1-207ENST00000483128 GYG1P46976 350 aa17.64■□□□□ 0.41
SHANK1-207ENST00000483128 UBE4AQ14139 1066 aa17.64■□□□□ 0.41
SHANK1-207ENST00000483128 RGMBQ6NW40 437 aa17.64■□□□□ 0.41
SHANK1-207ENST00000483128 ZIC5Q96T25 663 aa17.64■□□□□ 0.41
SHANK1-207ENST00000483128 TSKSQ9UJT2 592 aa17.64■□□□□ 0.41
SHANK1-207ENST00000483128 THSD7BQ9C0I4 1608 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms