RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 XDHP47989 1333 aa9.55□□□□□ -0.88
CSDE1-206ENST00000483030 LRRC37AA6NMS7 1700 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 TBC1D8O95759 1140 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 TTLL12Q14166 644 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-206ENST00000483030 NBPF9Q3BBW0 867 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 C8orf58Q8NAV2 365 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-206ENST00000483030 MXD3Q9BW11 206 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 HDAC9Q9UKV0 1011 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 PITPNM2Q9BZ72 1349 aa9.54□□□□□ -0.88
CSDE1-206ENST00000483030 APAF1O14727 1248 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 DDX58O95786 925 aaKnown RBP9.53□□□□□ -0.88
CSDE1-206ENST00000483030 GNAI1P63096 354 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 MKRN3Q13064 507 aaKnown RBP9.53□□□□□ -0.88
CSDE1-206ENST00000483030 ZNF296Q8WUU4 475 aaPredicted RBP9.53□□□□□ -0.88
CSDE1-206ENST00000483030 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 CDC5LQ99459 802 aaKnown RBP9.53□□□□□ -0.88
CSDE1-206ENST00000483030 IFT57Q9NWB7 429 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 HPS5Q9UPZ3 1129 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 MAP3K2Q9Y2U5 619 aa9.53□□□□□ -0.88
CSDE1-206ENST00000483030 DDX60Q8IY21 1712 aaKnown RBP9.53□□□□□ -0.88
CSDE1-206ENST00000483030 TM4SF4P48230 202 aa9.52□□□□□ -0.89
CSDE1-206ENST00000483030 CTSWP56202 376 aa9.52□□□□□ -0.89
CSDE1-206ENST00000483030 PKN2Q16513 984 aaKnown RBP9.52□□□□□ -0.89
CSDE1-206ENST00000483030 DACT2Q5SW24 774 aa9.52□□□□□ -0.89
CSDE1-206ENST00000483030 CCDC30Q5VVM6 783 aa9.52□□□□□ -0.89
CSDE1-206ENST00000483030 OGFOD1Q8N543 542 aa9.52□□□□□ -0.89
CSDE1-206ENST00000483030 TTLL11Q8NHH1 800 aa9.52□□□□□ -0.89
CSDE1-206ENST00000483030 BSDC1Q9NW68 430 aaPredicted RBP9.52□□□□□ -0.89
CSDE1-206ENST00000483030 ZNF609O15014 1411 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 GPR25O00155 361 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 WNT10BO00744 389 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 SASH1O94885 1247 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 IGKV5-2P06315 115 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 NF2P35240 595 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
CSDE1-206ENST00000483030 PTPN12Q05209 780 aaKnown RBP9.51□□□□□ -0.89
CSDE1-206ENST00000483030 CALD1Q05682 793 aaKnown RBP9.51□□□□□ -0.89
CSDE1-206ENST00000483030 PRKG1Q13976 671 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 KSR2Q6VAB6 950 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 CHRDL2Q6WN34 429 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 TXNRD3Q86VQ6 643 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 TSPYL6Q8N831 410 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 GREM2Q9H772 168 aa9.51□□□□□ -0.89
CSDE1-206ENST00000483030 POLR2AP24928 1970 aaKnown RBP9.5□□□□□ -0.89
CSDE1-206ENST00000483030 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 STRIP1Q5VSL9 837 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
CSDE1-206ENST00000483030 TTLL5Q6EMB2 1281 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 PI4KAP1Q8N8J0 262 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 CHMP4AQ9BY43 222 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 COA1Q9GZY4 146 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 R3HDMLQ9H3Y0 253 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 MED23Q9ULK4 1368 aa9.5□□□□□ -0.89
CSDE1-206ENST00000483030 NEXNQ0ZGT2 675 aa9.49□□□□□ -0.89
CSDE1-206ENST00000483030 CWF19L2Q2TBE0 894 aaKnown RBP9.49□□□□□ -0.89
CSDE1-206ENST00000483030 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
CSDE1-206ENST00000483030 FBXO46Q6PJ61 603 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-206ENST00000483030 ARMC9Q7Z3E5 817 aa9.49□□□□□ -0.89
CSDE1-206ENST00000483030 KIAA0825Q8IV33 1275 aa9.49□□□□□ -0.89
CSDE1-206ENST00000483030 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-206ENST00000483030 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
CSDE1-206ENST00000483030 MYO3BQ8WXR4 1341 aa9.49□□□□□ -0.89
CSDE1-206ENST00000483030 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 H7C1W4 665 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 FKTNO75072 461 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 KLRK1P26718 216 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
CSDE1-206ENST00000483030 MMP14P50281 582 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 GTF2IP78347 998 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 SREBF2Q12772 1141 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 LDLRAD1Q5T700 205 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 ANGEL1Q9UNK9 670 aaKnown RBP9.48□□□□□ -0.89
CSDE1-206ENST00000483030 FZD1Q9UP38 647 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 ZNF804BA4D1E1 1349 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 PDE4DIPQ5VU43 2346 aa9.48□□□□□ -0.89
CSDE1-206ENST00000483030 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 ITGA6P23229 1130 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 SPRYD7Q5W111 196 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 G2E3Q7L622 706 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 APOBEC3FQ8IUX4 373 aaKnown RBP9.47□□□□□ -0.89
CSDE1-206ENST00000483030 TSR2Q969E8 191 aaKnown RBP9.47□□□□□ -0.89
CSDE1-206ENST00000483030 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 ZBED3Q96IU2 234 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-206ENST00000483030 STK31Q9BXU1 1019 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 ANKRD2Q9GZV1 360 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 DEFB129Q9H1M3 183 aa9.47□□□□□ -0.89
CSDE1-206ENST00000483030 PRKRIP1Q9H875 184 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-206ENST00000483030 TNRC18O15417 2968 aaPredicted RBP9.46□□□□□ -0.89
CSDE1-206ENST00000483030 SNAP23O00161 211 aa9.46□□□□□ -0.9
CSDE1-206ENST00000483030 KCNJ4P48050 445 aa9.46□□□□□ -0.9
CSDE1-206ENST00000483030 GCKRQ14397 625 aa9.46□□□□□ -0.9
CSDE1-206ENST00000483030 DLGAP5Q15398 846 aa9.46□□□□□ -0.9
CSDE1-206ENST00000483030 CFHR5Q9BXR6 569 aa9.46□□□□□ -0.9
CSDE1-206ENST00000483030 CD209Q9NNX6 404 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms