RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SNAP23O00161 211 aa10.93□□□□□ -0.66
SNX4-205ENST00000482965 EYA2O00167 538 aa10.93□□□□□ -0.66
SNX4-205ENST00000482965 SRGAP3O43295 1099 aa10.93□□□□□ -0.66
SNX4-205ENST00000482965 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
SNX4-205ENST00000482965 PTPN12Q05209 780 aaKnown RBP10.93□□□□□ -0.66
SNX4-205ENST00000482965 SIL1Q9H173 461 aa10.93□□□□□ -0.66
SNX4-205ENST00000482965 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
SNX4-205ENST00000482965 POTECB2RU33 542 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 PSMD14O00487 310 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 ZBTB7BO15156 539 aaPredicted RBP10.92□□□□□ -0.66
SNX4-205ENST00000482965 KLRK1P26718 216 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
SNX4-205ENST00000482965 MTX1Q13505 466 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 UBE4AQ14139 1066 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 MVPQ14764 893 aaKnown RBP10.92□□□□□ -0.66
SNX4-205ENST00000482965 TXNRD3Q86VQ6 643 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 DDX19BQ9UMR2 479 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 PA2G4Q9UQ80 394 aaKnown RBP10.92□□□□□ -0.66
SNX4-205ENST00000482965 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
SNX4-205ENST00000482965 CIAO1O76071 339 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 TOMM70O94826 608 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 GMPSP49915 693 aaPredicted RBP10.91□□□□□ -0.66
SNX4-205ENST00000482965 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 C15orf52Q6ZUT6 534 aaKnown RBP10.91□□□□□ -0.66
SNX4-205ENST00000482965 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 TAF1DQ9H5J8 278 aaPredicted RBP10.91□□□□□ -0.66
SNX4-205ENST00000482965 COPRSQ9NQ92 184 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 KCNQ5Q9NR82 932 aa10.91□□□□□ -0.66
SNX4-205ENST00000482965 PNMA6EA0A0J9YXQ4 647 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 PDE8BO95263 885 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 EPHX2P34913 555 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 IL15P40933 162 aaPredicted RBP10.9□□□□□ -0.66
SNX4-205ENST00000482965 SCNN1DP51172 638 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 C1QTNF8P60827 252 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
SNX4-205ENST00000482965 C20orf194Q5TEA3 1177 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 ATG9AQ7Z3C6 839 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 ZNF804AQ7Z570 1209 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
SNX4-205ENST00000482965 CHMP4BQ9H444 224 aaKnown RBP10.9□□□□□ -0.66
SNX4-205ENST00000482965 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.66
SNX4-205ENST00000482965 IRS2Q9Y4H2 1338 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 USP17L3A6NCW0 530 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 USP17L4A6NCW7 530 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 VIL1P09327 827 aaKnown RBP10.89□□□□□ -0.67
SNX4-205ENST00000482965 RPS12P25398 132 aaKnown RBP10.89□□□□□ -0.67
SNX4-205ENST00000482965 EPS15P42566 896 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 RRP1P56182 461 aaKnown RBP10.89□□□□□ -0.67
SNX4-205ENST00000482965 ATP8B2P98198 1209 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 PUM3Q15397 648 aaKnown RBP10.89□□□□□ -0.67
SNX4-205ENST00000482965 USP17L1Q7RTZ2 530 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 VGLL2Q8N8G2 317 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 CD209Q9NNX6 404 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 GPRC5DQ9NZD1 345 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
SNX4-205ENST00000482965 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
SNX4-205ENST00000482965 ZNF646O15015 1829 aaPredicted RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 IFIT1P09914 478 aaKnown RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 SLC5A1P13866 664 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 HIBADHP31937 336 aaKnown RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 GYG1P46976 350 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNX4-205ENST00000482965 RSBN1LQ6PCB5 846 aaPredicted RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 PNMA8AQ86V59 439 aaPredicted RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 VPS37DQ86XT2 251 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 SMC1BQ8NDV3 1235 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 DPF2Q92785 391 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 ADARB2Q9NS39 739 aaKnown RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 CNOT7Q9UIV1 285 aaKnown RBP10.88□□□□□ -0.67
SNX4-205ENST00000482965 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
SNX4-205ENST00000482965 H7C1D1 291 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 POTEJP0CG39 1038 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 IL1R1P14778 569 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 FGFR2P21802 821 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 GTF2IP78347 998 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 FSTL1Q12841 308 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 OS9Q13438 667 aaPredicted RBP10.87□□□□□ -0.67
SNX4-205ENST00000482965 ATP2B3Q16720 1220 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 STRIP1Q5VSL9 837 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 CEP85Q6P2H3 762 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 LDHDQ86WU2 507 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 AGBL3Q8NEM8 1001 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 SSH3Q8TE77 659 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 LPIN2Q92539 896 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 FAM84BQ96KN1 310 aaPredicted RBP10.87□□□□□ -0.67
SNX4-205ENST00000482965 ZBTB40Q9NUA8 1239 aa10.87□□□□□ -0.67
SNX4-205ENST00000482965 ZNF609O15014 1411 aa10.86□□□□□ -0.67
SNX4-205ENST00000482965 ADAMTSL1Q8N6G6 1762 aa10.86□□□□□ -0.67
SNX4-205ENST00000482965 SHTN1A0MZ66 631 aa10.86□□□□□ -0.67
SNX4-205ENST00000482965 SURF6O75683 361 aaKnown RBP10.86□□□□□ -0.67
SNX4-205ENST00000482965 TFCP2Q12800 502 aa10.86□□□□□ -0.67
SNX4-205ENST00000482965 DACT2Q5SW24 774 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms