RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 EYA3Q99504 573 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 USP44Q9H0E7 712 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 RRAGCQ9HB90 399 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 CNNM1Q9NRU3 951 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 RCAN3Q9UKA8 241 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 XDHP47989 1333 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
SPTLC1-206ENST00000482632 COL4A5P29400 1685 aa12.52□□□□□ -0.4
SPTLC1-206ENST00000482632 LTBP1Q14766 1721 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 GLTPD2A6NH11 291 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 DDNO94850 711 aaPredicted RBP12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 MEIS3Q99687 375 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 BSDC1Q9NW68 430 aaPredicted RBP12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 POLLQ9UGP5 575 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 UTYO14607 1347 aa12.52□□□□□ -0.41
SPTLC1-206ENST00000482632 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 KIAA2012Q0VF49 1180 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 INTS3Q68E01 1043 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 LDHAL6AQ6ZMR3 332 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 KAZALD1Q96I82 304 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 RTFDC1Q9BY42 306 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-206ENST00000482632 KIF3CO14782 793 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 GNAI3P08754 354 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 PSEN1P49768 467 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 CHRNDQ07001 517 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 ANKRD44Q8N8A2 993 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
SPTLC1-206ENST00000482632 WDR90Q96KV7 1748 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 ECE2O60344 883 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 TAF5LO75529 589 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 RAD17O75943 681 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 APLP1P51693 650 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 KLHDC4Q8TBB5 520 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 PANK1Q8TE04 598 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
SPTLC1-206ENST00000482632 SCN4AP35499 1836 aa12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 FZD9O00144 591 aa12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 RLBP1P12271 317 aa12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 VEGFAP15692 232 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 PUS3Q9BZE2 481 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 SIL1Q9H173 461 aa12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
SPTLC1-206ENST00000482632 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 MS4A1P11836 297 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 HTRA3P83110 453 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 METTL24Q5JXM2 366 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 CIAPIN1Q6FI81 312 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 TNS4Q8IZW8 715 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 LEMD3Q9Y2U8 911 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
SPTLC1-206ENST00000482632 YDJCA8MPS7 323 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 SNAP23O00161 211 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 GNAI2P04899 355 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 CXCL9Q07325 125 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 LRRC24Q50LG9 513 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 GPC2Q8N158 579 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 C1orf115Q9H7X2 142 aa12.46□□□□□ -0.41
SPTLC1-206ENST00000482632 MED23Q9ULK4 1368 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 TNIP1Q15025 636 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 RYDENQ9NUL5 291 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 HACL1Q9UJ83 578 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 PSME4Q14997 1843 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 MYH13Q9UKX3 1938 aa12.45□□□□□ -0.42
SPTLC1-206ENST00000482632 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
SPTLC1-206ENST00000482632 PSMD14O00487 310 aa12.44□□□□□ -0.42
SPTLC1-206ENST00000482632 SRGAP3O43295 1099 aa12.44□□□□□ -0.42
SPTLC1-206ENST00000482632 KLRK1P26718 216 aa12.44□□□□□ -0.42
SPTLC1-206ENST00000482632 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1-206ENST00000482632 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
SPTLC1-206ENST00000482632 TOMM70O94826 608 aa12.43□□□□□ -0.42
SPTLC1-206ENST00000482632 EPHX2P34913 555 aa12.43□□□□□ -0.42
SPTLC1-206ENST00000482632 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-206ENST00000482632 ZNF804AQ7Z570 1209 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms