RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLC12A5Q9H2X9 1139 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 OSBPL3Q9H4L5 887 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 RIMS2Q9UQ26 1411 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 GNRH1P01148 92 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 FURINP09958 794 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 SCTRP47872 440 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 DUSP27Q5VZP5 1158 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 RNF135Q8IUD6 432 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 CEP126Q9P2H0 1117 aa9.9□□□□□ -0.82
SNX13-208ENST00000482558 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
SNX13-208ENST00000482558 KIF13AQ9H1H9 1805 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 MYO5BQ9ULV0 1848 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 TMEM88BA6NKF7 163 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 TCERG1O14776 1098 aaKnown RBP9.89□□□□□ -0.83
SNX13-208ENST00000482558 SKIP12755 728 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 UBAP2LQ14157 1087 aaKnown RBP9.89□□□□□ -0.83
SNX13-208ENST00000482558 LINC00114Q6XXX2 140 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 ESYT1Q9BSJ8 1104 aa9.89□□□□□ -0.83
SNX13-208ENST00000482558 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 ATP7BP35670 1465 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 ZNF16P17020 682 aaPredicted RBP9.88□□□□□ -0.83
SNX13-208ENST00000482558 HOXB4P17483 251 aaPredicted RBP9.88□□□□□ -0.83
SNX13-208ENST00000482558 UBXN4Q92575 508 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 ATXN7L1Q9ULK2 861 aaPredicted RBP9.88□□□□□ -0.83
SNX13-208ENST00000482558 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
SNX13-208ENST00000482558 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 APAF1O14727 1248 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 CT47B1P0C2W7 299 aaPredicted RBP9.87□□□□□ -0.83
SNX13-208ENST00000482558 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 CNKSR1Q969H4 720 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 GPAMQ9HCL2 828 aa9.87□□□□□ -0.83
SNX13-208ENST00000482558 GNB5O14775 395 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 TECPR2O15040 1411 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 ATG7O95352 703 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 MTHFSP49914 203 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 CENPCQ03188 943 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 GRIN2CQ14957 1233 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 DNAJC14Q6Y2X3 702 aaPredicted RBP9.86□□□□□ -0.83
SNX13-208ENST00000482558 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 BCL2L13Q9BXK5 485 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 STK26Q9P289 416 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 ANKRD26Q9UPS8 1709 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 A0A1W2PP64 1363 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 TNRQ92752 1358 aa9.86□□□□□ -0.83
SNX13-208ENST00000482558 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 ZC3H6P61129 1189 aaKnown RBP9.85□□□□□ -0.83
SNX13-208ENST00000482558 PDE3AQ14432 1141 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 PGBD3Q8N328 593 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 PLPP7Q8NBV4 271 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 EXOC6Q8TAG9 804 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 CDK19Q9BWU1 502 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 HRH3Q9Y5N1 445 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 KNDC1Q76NI1 1749 aa9.85□□□□□ -0.83
SNX13-208ENST00000482558 SHPRHQ149N8 1683 aa9.84□□□□□ -0.83
SNX13-208ENST00000482558 IL2RAP01589 272 aa9.84□□□□□ -0.83
SNX13-208ENST00000482558 AMPD1P23109 780 aa9.84□□□□□ -0.83
SNX13-208ENST00000482558 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
SNX13-208ENST00000482558 PLEKHM2Q8IWE5 1019 aa9.84□□□□□ -0.83
SNX13-208ENST00000482558 PSMG3-AS1Q96PY0 264 aa9.84□□□□□ -0.83
SNX13-208ENST00000482558 ZSCAN10Q96SZ4 725 aaPredicted RBP9.84□□□□□ -0.83
SNX13-208ENST00000482558 SETD1AO15047 1707 aaKnown RBP9.83□□□□□ -0.84
SNX13-208ENST00000482558 C1QTNF9BB2RNN3 333 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 BMP4P12644 408 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 GTF2E1P29083 439 aaPredicted RBP9.83□□□□□ -0.84
SNX13-208ENST00000482558 NCOA4Q13772 614 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 EFHC2Q5JST6 749 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 GNASQ5JWF2 1037 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 CENPQQ7L2Z9 268 aaPredicted RBP9.83□□□□□ -0.84
SNX13-208ENST00000482558 DEPDC4Q8N2C3 294 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 SUV39H2Q9H5I1 410 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 NOP53Q9NZM5 478 aaKnown RBP9.83□□□□□ -0.84
SNX13-208ENST00000482558 IQSEC2Q5JU85 1478 aa9.83□□□□□ -0.84
SNX13-208ENST00000482558 IL16Q14005 1332 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 ANKRD62A6NC57 917 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 C2CD2LO14523 706 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 NEFMP07197 916 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 CERS3Q8IU89 383 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 CCDC146Q8IYE0 955 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 PHTF2Q8N3S3 785 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 TCP11L2Q8N4U5 519 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 XAGE2Q96GT9 111 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 RAB6BQ9NRW1 208 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 NDFIP2Q9NV92 336 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 GGA1Q9UJY5 639 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 DOLKQ9UPQ8 538 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 PNPLA6Q8IY17 1366 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 TMEM2Q9UHN6 1383 aa9.82□□□□□ -0.84
SNX13-208ENST00000482558 CPS1P31327 1500 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms