RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	TSPYL6	Q8N831	410 aa		32.49	■■■□□ 2.79
STK40-208	ENST00000482458	PI4KAP1	Q8N8J0	262 aa		32.49	■■■□□ 2.79
STK40-208	ENST00000482458	GREM2	Q9H772	168 aa		32.49	■■■□□ 2.79
STK40-208	ENST00000482458	BSDC1	Q9NW68	430 aa	Predicted RBP	32.49	■■■□□ 2.79
STK40-208	ENST00000482458	NBPF9	Q3BBW0	867 aa		32.48	■■■□□ 2.79
STK40-208	ENST00000482458	UBE2Q2L	H0YL09	131 aa		32.47	■■■□□ 2.79
STK40-208	ENST00000482458	DACT2	Q5SW24	774 aa		32.47	■■■□□ 2.79
STK40-208	ENST00000482458	PRAMEF18	Q5VWM3	479 aa		32.47	■■■□□ 2.79
STK40-208	ENST00000482458	MXD3	Q9BW11	206 aa		32.47	■■■□□ 2.79
STK40-208	ENST00000482458	TNRC18	O15417	2968 aa	Predicted RBP	32.46	■■■□□ 2.79
STK40-208	ENST00000482458	CCT4	P50991	539 aa	Known RBP	32.46	■■■□□ 2.79
STK40-208	ENST00000482458	NEXN	Q0ZGT2	675 aa		32.46	■■■□□ 2.79
STK40-208	ENST00000482458	FBXW7	Q969H0	707 aa		32.46	■■■□□ 2.79
STK40-208	ENST00000482458	OGFOD1	Q8N543	542 aa		32.45	■■■□□ 2.79
STK40-208	ENST00000482458	CWF19L2	Q2TBE0	894 aa	Known RBP	32.44	■■■□□ 2.78
STK40-208	ENST00000482458	TTLL12	Q14166	644 aa	Predicted RBP	32.43	■■■□□ 2.78
STK40-208	ENST00000482458	STK31	Q9BXU1	1019 aa		32.43	■■■□□ 2.78
STK40-208	ENST00000482458	COA1	Q9GZY4	146 aa		32.43	■■■□□ 2.78
STK40-208	ENST00000482458	NEURL1B	A8MQ27	555 aa		32.42	■■■□□ 2.78
STK40-208	ENST00000482458	STRIP1	Q5VSL9	837 aa		32.42	■■■□□ 2.78
STK40-208	ENST00000482458	MYO3B	Q8WXR4	1341 aa		32.42	■■■□□ 2.78
STK40-208	ENST00000482458	WNT10B	O00744	389 aa		32.41	■■■□□ 2.78
STK40-208	ENST00000482458	TSR2	Q969E8	191 aa	Known RBP	32.41	■■■□□ 2.78
STK40-208	ENST00000482458	UBE3B	Q7Z3V4	1068 aa		32.4	■■■□□ 2.78
STK40-208	ENST00000482458	TXNRD3	Q86VQ6	643 aa		32.4	■■■□□ 2.78
STK40-208	ENST00000482458	LEMD3	Q9Y2U8	911 aa		32.4	■■■□□ 2.78
STK40-208	ENST00000482458	SPEF2	Q9C093	1822 aa		32.4	■■■□□ 2.78
STK40-208	ENST00000482458	SASH1	O94885	1247 aa		32.39	■■■□□ 2.78
STK40-208	ENST00000482458	TBC1D8	O95759	1140 aa		32.39	■■■□□ 2.78
STK40-208	ENST00000482458	NF2	P35240	595 aa		32.39	■■■□□ 2.78
STK40-208	ENST00000482458	IGHMBP2	P38935	993 aa	Known RBP	32.39	■■■□□ 2.78
STK40-208	ENST00000482458		H7C1W4	665 aa		32.38	■■■□□ 2.77
STK40-208	ENST00000482458	HDAC9	Q9UKV0	1011 aa		32.38	■■■□□ 2.77
STK40-208	ENST00000482458	MYH3	P11055	1940 aa		32.38	■■■□□ 2.77
STK40-208	ENST00000482458	G2E3	Q7L622	706 aa		32.37	■■■□□ 2.77
STK40-208	ENST00000482458	ZNF296	Q8WUU4	475 aa	Predicted RBP	32.37	■■■□□ 2.77
STK40-208	ENST00000482458	HPS5	Q9UPZ3	1129 aa		32.37	■■■□□ 2.77
STK40-208	ENST00000482458	ZNF804B	A4D1E1	1349 aa		32.36	■■■□□ 2.77
STK40-208	ENST00000482458	PDE4DIP	Q5VU43	2346 aa		32.36	■■■□□ 2.77
STK40-208	ENST00000482458	ZNF646	O15015	1829 aa	Predicted RBP	32.35	■■■□□ 2.77
STK40-208	ENST00000482458	KLRK1	P26718	216 aa		32.35	■■■□□ 2.77
STK40-208	ENST00000482458	TM4SF4	P48230	202 aa		32.35	■■■□□ 2.77
STK40-208	ENST00000482458	MMP14	P50281	582 aa		32.35	■■■□□ 2.77
STK40-208	ENST00000482458	MKRN3	Q13064	507 aa	Known RBP	32.35	■■■□□ 2.77
STK40-208	ENST00000482458	TTLL5	Q6EMB2	1281 aa		32.35	■■■□□ 2.77
STK40-208	ENST00000482458	ANKRD2	Q9GZV1	360 aa		32.35	■■■□□ 2.77
STK40-208	ENST00000482458	ITGA6	P23229	1130 aa		32.34	■■■□□ 2.77
STK40-208	ENST00000482458	PKN2	Q16513	984 aa	Known RBP	32.34	■■■□□ 2.77
STK40-208	ENST00000482458	TWISTNB	Q3B726	338 aa	Predicted RBP	32.34	■■■□□ 2.77
STK40-208	ENST00000482458	SLC4A2	P04920	1241 aa		32.33	■■■□□ 2.77
STK40-208	ENST00000482458	KIAA0825	Q8IV33	1275 aa		32.33	■■■□□ 2.77
STK40-208	ENST00000482458	MPHOSPH8	Q99549	860 aa		32.33	■■■□□ 2.77
STK40-208	ENST00000482458	PLA2G12B	Q9BX93	195 aa		32.33	■■■□□ 2.77
STK40-208	ENST00000482458	PRKG1	Q13976	671 aa		32.32	■■■□□ 2.76
STK40-208	ENST00000482458	GCKR	Q14397	625 aa		32.32	■■■□□ 2.76
STK40-208	ENST00000482458	ARMC9	Q7Z3E5	817 aa		32.32	■■■□□ 2.76
STK40-208	ENST00000482458	APOBEC3F	Q8IUX4	373 aa	Known RBP	32.32	■■■□□ 2.76
STK40-208	ENST00000482458	GTF2I	P78347	998 aa		32.31	■■■□□ 2.76
STK40-208	ENST00000482458	PTPN12	Q05209	780 aa	Known RBP	32.31	■■■□□ 2.76
STK40-208	ENST00000482458	GPR25	O00155	361 aa		32.3	■■■□□ 2.76
STK40-208	ENST00000482458	SREBF2	Q12772	1141 aa		32.3	■■■□□ 2.76
STK40-208	ENST00000482458	KCNJ4	P48050	445 aa		32.29	■■■□□ 2.76
STK40-208	ENST00000482458	CASP7	P55210	303 aa		32.29	■■■□□ 2.76
STK40-208	ENST00000482458	CSF1R	P07333	972 aa		32.28	■■■□□ 2.76
STK40-208	ENST00000482458	NOM1	Q5C9Z4	860 aa	Known RBP	32.28	■■■□□ 2.76
STK40-208	ENST00000482458	ZBED3	Q96IU2	234 aa	Predicted RBP	32.28	■■■□□ 2.76
STK40-208	ENST00000482458	MYH16	Q9H6N6	1097 aa		32.28	■■■□□ 2.76
STK40-208	ENST00000482458	CHRND	Q07001	517 aa		32.27	■■■□□ 2.76
STK40-208	ENST00000482458	FLII	Q13045	1269 aa		32.27	■■■□□ 2.76
STK40-208	ENST00000482458	CCDC27	Q2M243	656 aa		32.27	■■■□□ 2.76
STK40-208	ENST00000482458	WWC1	Q8IX03	1113 aa		32.27	■■■□□ 2.76
STK40-208	ENST00000482458	LDLRAD1	Q5T700	205 aa		32.26	■■■□□ 2.75
STK40-208	ENST00000482458	CD209	Q9NNX6	404 aa		32.26	■■■□□ 2.75
STK40-208	ENST00000482458	ANGEL1	Q9UNK9	670 aa	Known RBP	32.26	■■■□□ 2.75
STK40-208	ENST00000482458	FKBP5	Q13451	457 aa	Predicted RBP	32.25	■■■□□ 2.75
STK40-208	ENST00000482458	DNAAF4	Q8WXU2	420 aa		32.25	■■■□□ 2.75
STK40-208	ENST00000482458	DLGAP5	Q15398	846 aa		32.24	■■■□□ 2.75
STK40-208	ENST00000482458	SPRYD7	Q5W111	196 aa		32.24	■■■□□ 2.75
STK40-208	ENST00000482458	LINS1	Q8NG48	757 aa		32.24	■■■□□ 2.75
STK40-208	ENST00000482458	ANKRD18B	A2A2Z9	1011 aa		32.23	■■■□□ 2.75
STK40-208	ENST00000482458	FBXO46	Q6PJ61	603 aa	Predicted RBP	32.23	■■■□□ 2.75
STK40-208	ENST00000482458	CFHR5	Q9BXR6	569 aa		32.23	■■■□□ 2.75
STK40-208	ENST00000482458	DEFB129	Q9H1M3	183 aa		32.23	■■■□□ 2.75
STK40-208	ENST00000482458	R3HDML	Q9H3Y0	253 aa		32.23	■■■□□ 2.75
STK40-208	ENST00000482458	FZD1	Q9UP38	647 aa		32.23	■■■□□ 2.75
STK40-208	ENST00000482458	COL1A1	P02452	1464 aa	Predicted RBP	32.23	■■■□□ 2.75
STK40-208	ENST00000482458	SNAP23	O00161	211 aa		32.22	■■■□□ 2.75
STK40-208	ENST00000482458	FKTN	O75072	461 aa		32.22	■■■□□ 2.75
STK40-208	ENST00000482458	CERS5	Q8N5B7	392 aa		32.22	■■■□□ 2.75
STK40-208	ENST00000482458	PRPF38B	Q5VTL8	546 aa	Known RBP	32.21	■■■□□ 2.75
STK40-208	ENST00000482458	IL16	Q14005	1332 aa		32.21	■■■□□ 2.75
STK40-208	ENST00000482458	TAF5L	O75529	589 aa		32.2	■■■□□ 2.75
STK40-208	ENST00000482458	CCDC184	Q52MB2	194 aa		32.2	■■■□□ 2.75
STK40-208	ENST00000482458	HELB	Q8NG08	1087 aa	Predicted RBP	32.2	■■■□□ 2.75
STK40-208	ENST00000482458	PCDH10	Q9P2E7	1040 aa		32.2	■■■□□ 2.75
STK40-208	ENST00000482458	IRS2	Q9Y4H2	1338 aa		32.2	■■■□□ 2.74
STK40-208	ENST00000482458	SLC10A4	Q96EP9	437 aa		32.19	■■■□□ 2.74
STK40-208	ENST00000482458	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.19	■■■□□ 2.74
STK40-208	ENST00000482458	ALDH1A1	P00352	501 aa		32.18	■■■□□ 2.74
STK40-208	ENST00000482458	C15orf52	Q6ZUT6	534 aa	Known RBP	32.18	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms