RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 DLG5Q8TDM6 1919 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 GCKRQ14397 625 aa14.76□□□□□ -0.05
VPS52-218ENST00000482399 NSUN7Q8NE18 718 aaKnown RBP14.76□□□□□ -0.05
VPS52-218ENST00000482399 SPTLC2O15270 562 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 GSDMDP57764 484 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 TRIM29Q14134 588 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 KLHL10Q6JEL2 608 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 ERO1AQ96HE7 468 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 PAG1Q9NWQ8 432 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 NEO1Q92859 1461 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 TMEM2Q9UHN6 1383 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 DIP2CQ9Y2E4 1556 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 CTIFO43310 598 aaKnown RBP14.75□□□□□ -0.05
VPS52-218ENST00000482399 IGKV5-2P06315 115 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 TOP1P11387 765 aaKnown RBP14.75□□□□□ -0.05
VPS52-218ENST00000482399 ATP1A3P13637 1013 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 GNG11P61952 73 aa14.75□□□□□ -0.05
VPS52-218ENST00000482399 TTC39AQ5SRH9 613 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 CARD6Q9BX69 1037 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 DDX41Q9UJV9 622 aaKnown RBP14.74□□□□□ -0.05
VPS52-218ENST00000482399 NEURL1BA8MQ27 555 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 CAVIN2O95810 425 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 STOX1Q6ZVD7 989 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 IQCB1Q15051 598 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 AMOTQ4VCS5 1084 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 ZNF496Q96IT1 587 aaPredicted RBP14.74□□□□□ -0.05
VPS52-218ENST00000482399 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
VPS52-218ENST00000482399 TMEM131LA2VDJ0 1609 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 KARSQ15046 597 aaKnown RBP14.73□□□□□ -0.05
VPS52-218ENST00000482399 CHRNA2Q15822 529 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 KAZALD1Q96I82 304 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 E7EWF7 191 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 IDH1O75874 414 aaKnown RBP14.73□□□□□ -0.05
VPS52-218ENST00000482399 SEC31AO94979 1220 aaKnown RBP14.73□□□□□ -0.05
VPS52-218ENST00000482399 GCP02774 474 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 SYKP43405 635 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 BMS1Q14692 1282 aaKnown RBP14.73□□□□□ -0.05
VPS52-218ENST00000482399 MRFAP1L1Q96HT8 127 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 CEP126Q9P2H0 1117 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
VPS52-218ENST00000482399 ZNF202O95125 648 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 HMGB1P09429 215 aaKnown RBP14.72□□□□□ -0.05
VPS52-218ENST00000482399 IMMTQ16891 758 aaKnown RBP14.72□□□□□ -0.05
VPS52-218ENST00000482399 CPLX2Q6PUV4 134 aaKnown RBP14.72□□□□□ -0.05
VPS52-218ENST00000482399 AIFM3Q96NN9 605 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 ZNF790Q6PG37 636 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 LRRN4CLQ8ND94 238 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 MYL10Q9BUA6 226 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 PRC1O43663 620 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 DHX16O60231 1041 aaKnown RBP14.72□□□□□ -0.05
VPS52-218ENST00000482399 THEMISQ8N1K5 641 aaPredicted RBP14.72□□□□□ -0.05
VPS52-218ENST00000482399 ORAI2Q96SN7 254 aa14.72□□□□□ -0.05
VPS52-218ENST00000482399 KDRP35968 1356 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 CABP4P57796 275 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 FANCCQ00597 558 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 PHKBQ93100 1093 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
VPS52-218ENST00000482399 KIAA1468Q9P260 1216 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 ATP5JP18859 108 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 CNNM3Q8NE01 707 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 NEK11Q8NG66 645 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 CABLES1Q8TDN4 633 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 RCOR1Q9UKL0 485 aa14.71□□□□□ -0.05
VPS52-218ENST00000482399 RIMS1Q86UR5 1692 aaKnown RBP14.71□□□□□ -0.05
VPS52-218ENST00000482399 PDIA3P30101 505 aaKnown RBP14.71□□□□□ -0.06
VPS52-218ENST00000482399 CCDC158Q5M9N0 1113 aa14.71□□□□□ -0.06
VPS52-218ENST00000482399 DHX40Q8IX18 779 aaKnown RBP14.71□□□□□ -0.06
VPS52-218ENST00000482399 KBTBD3Q8NAB2 608 aa14.71□□□□□ -0.06
VPS52-218ENST00000482399 PPP1R13BQ96KQ4 1090 aa14.71□□□□□ -0.06
VPS52-218ENST00000482399 TATP17735 454 aaPredicted RBP14.7□□□□□ -0.06
VPS52-218ENST00000482399 TIGD1Q96MW7 591 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 KIF2AO00139 706 aaPredicted RBP14.7□□□□□ -0.06
VPS52-218ENST00000482399 PFKFB2O60825 505 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 HOXB7P09629 217 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 HSPD1P10809 573 aaKnown RBP14.7□□□□□ -0.06
VPS52-218ENST00000482399 PNOCQ13519 176 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 TERF2Q15554 542 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 CLIC6Q96NY7 704 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 BABAM1Q9NWV8 329 aa14.7□□□□□ -0.06
VPS52-218ENST00000482399 ZNF213O14771 459 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 CCZ1BP86790 482 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 CCZ1P86791 482 aaPredicted RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 GABPB1Q06547 395 aaPredicted RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 MTX1Q13505 466 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 ZNF827Q17R98 1081 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 CCDC57Q2TAC2 916 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 LRRC24Q50LG9 513 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 TRMT44Q8IYL2 757 aaKnown RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 CCDC150Q8NCX0 1101 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 DESI2Q9BSY9 194 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 ZCCHC17Q9NP64 241 aaKnown RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 PTPN12Q05209 780 aaKnown RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 MCM6Q14566 821 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 NUP133Q8WUM0 1156 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 ALG1Q9BT22 464 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 LZTFL1Q9NQ48 299 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 243.4 ms