RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ADORA1P30542 326 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 PRELPP51888 382 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 TIMM10P62072 90 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 DOK7Q18PE1 504 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 DCAF8Q5TAQ9 597 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 TXNRD3Q86VQ6 643 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
HDAC1-208ENST00000482310 KIF1BPQ96EK5 621 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 PSMD1Q99460 953 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 EYA3Q99504 573 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
HDAC1-208ENST00000482310 A0A1B0GUL7 405 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
HDAC1-208ENST00000482310 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
HDAC1-208ENST00000482310 GYG1P46976 350 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 TNNI3KQ59H18 835 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 ANKRD45Q5TZF3 282 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 AACSQ86V21 672 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
HDAC1-208ENST00000482310 DBNDD1Q9H9R9 158 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
HDAC1-208ENST00000482310 FPGT-TNNI3KV9GXZ4 949 aa16.3■□□□□ 0.2
HDAC1-208ENST00000482310 ZNF646O15015 1829 aaPredicted RBP16.3■□□□□ 0.2
HDAC1-208ENST00000482310 MED23Q9ULK4 1368 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 UBE4AQ14139 1066 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 RTFDC1Q9BY42 306 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-208ENST00000482310 ZC3H12CQ9C0D7 883 aaKnown RBP16.29■□□□□ 0.2
HDAC1-208ENST00000482310 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
HDAC1-208ENST00000482310 RNF181Q9P0P0 153 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
HDAC1-208ENST00000482310 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
HDAC1-208ENST00000482310 FGFR2P21802 821 aa16.28■□□□□ 0.2
HDAC1-208ENST00000482310 GORABQ5T7V8 394 aa16.28■□□□□ 0.2
HDAC1-208ENST00000482310 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
HDAC1-208ENST00000482310 LPIN2Q92539 896 aa16.28■□□□□ 0.2
HDAC1-208ENST00000482310 FBXW7Q969H0 707 aa16.28■□□□□ 0.2
HDAC1-208ENST00000482310 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
HDAC1-208ENST00000482310 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
HDAC1-208ENST00000482310 AKAP11Q9UKA4 1901 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 LTBP3Q9NS15 1303 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 KIF3CO14782 793 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 LMNB1P20700 586 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 BCAMP50895 628 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 C9orf131Q5VYM1 1079 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
HDAC1-208ENST00000482310 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
HDAC1-208ENST00000482310 XAGE2Q96GT9 111 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 LNPKQ9C0E8 428 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 JAG2Q9Y219 1238 aa16.27■□□□□ 0.2
HDAC1-208ENST00000482310 ECE2O60344 883 aa16.26■□□□□ 0.19
HDAC1-208ENST00000482310 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
HDAC1-208ENST00000482310 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
HDAC1-208ENST00000482310 IFFO2Q5TF58 517 aa16.26■□□□□ 0.19
HDAC1-208ENST00000482310 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
HDAC1-208ENST00000482310 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
HDAC1-208ENST00000482310 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
HDAC1-208ENST00000482310 IRS2Q9Y4H2 1338 aa16.25■□□□□ 0.19
HDAC1-208ENST00000482310 HIBADHP31937 336 aaKnown RBP16.25■□□□□ 0.19
HDAC1-208ENST00000482310 PHKA1P46020 1223 aa16.25■□□□□ 0.19
HDAC1-208ENST00000482310 CAVIN4Q5BKX8 364 aa16.25■□□□□ 0.19
HDAC1-208ENST00000482310 ERICH6BQ5W0A0 696 aa16.25■□□□□ 0.19
HDAC1-208ENST00000482310 C16orf71Q8IYS4 520 aaPredicted RBP16.25■□□□□ 0.19
HDAC1-208ENST00000482310 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
HDAC1-208ENST00000482310 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
HDAC1-208ENST00000482310 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
HDAC1-208ENST00000482310 MYH7P12883 1935 aa16.25■□□□□ 0.19
HDAC1-208ENST00000482310 KDM2BQ8NHM5 1336 aa16.24■□□□□ 0.19
HDAC1-208ENST00000482310 FRAT2O75474 233 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-208ENST00000482310 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-208ENST00000482310 TTC39AQ5SRH9 613 aa16.24■□□□□ 0.19
HDAC1-208ENST00000482310 TSHZ3Q63HK5 1081 aa16.24■□□□□ 0.19
HDAC1-208ENST00000482310 FAM84BQ96KN1 310 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-208ENST00000482310 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
HDAC1-208ENST00000482310 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 RAD17O75943 681 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 HSPA6P17066 643 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 CENPQQ7L2Z9 268 aaPredicted RBP16.23■□□□□ 0.19
HDAC1-208ENST00000482310 SKAP1Q86WV1 359 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 KCNQ5Q9NR82 932 aa16.23■□□□□ 0.19
HDAC1-208ENST00000482310 NUCB1Q02818 461 aa16.22■□□□□ 0.19
HDAC1-208ENST00000482310 CCDC102BQ68D86 513 aa16.22■□□□□ 0.19
HDAC1-208ENST00000482310 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
HDAC1-208ENST00000482310 COA1Q9GZY4 146 aa16.22■□□□□ 0.19
HDAC1-208ENST00000482310 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
HDAC1-208ENST00000482310 ZNF541Q9H0D2 1346 aa16.21■□□□□ 0.19
HDAC1-208ENST00000482310 CCDC158Q5M9N0 1113 aa16.21■□□□□ 0.19
HDAC1-208ENST00000482310 PI16Q6UXB8 463 aa16.21■□□□□ 0.19
HDAC1-208ENST00000482310 C15orf52Q6ZUT6 534 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms