RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	GRAPL	Q8TC17	118 aa	Predicted RBP	11.23	□□□□□ -0.61
UBE2F-222	ENST00000482096	ZC3H15	Q8WU90	426 aa	Known RBP	11.23	□□□□□ -0.61
UBE2F-222	ENST00000482096	NECTIN2	Q92692	538 aa		11.23	□□□□□ -0.61
UBE2F-222	ENST00000482096	EPAS1	Q99814	870 aa		11.23	□□□□□ -0.61
UBE2F-222	ENST00000482096	MAP2K2	P36507	400 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	HIRA	P54198	1017 aa	Predicted RBP	11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	TNIP1	Q15025	636 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	KRT24	Q2M2I5	525 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	TYW1B	Q6NUM6	668 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	TMC4	Q7Z404	712 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	SAPCD2	Q86UD0	394 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	ABHD8	Q96I13	439 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	HHIPL1	Q96JK4	782 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	BEGAIN	Q9BUH8	593 aa		11.22	□□□□□ -0.61
UBE2F-222	ENST00000482096	YDJC	A8MPS7	323 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	MAP3K7	O43318	606 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	RAD17	O75943	681 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	CELF2	O95319	508 aa	Known RBP	11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	GRM1	Q13255	1194 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	TPRN	Q4KMQ1	711 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	PLBD2	Q8NHP8	589 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	BCL2L13	Q9BXK5	485 aa		11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2F-222	ENST00000482096	THSD7B	Q9C0I4	1608 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	AOC2	O75106	756 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	HOXB7	P09629	217 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	SF3B3	Q15393	1217 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	NEUROD2	Q15784	382 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	PPP4R3B	Q5MIZ7	849 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	VARS2	Q5ST30	1063 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	ANKRD13D	Q6ZTN6	518 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	CDC37L1	Q7L3B6	337 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	TRPM4	Q8TD43	1214 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	ZDHHC16	Q969W1	377 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	ISCA1	Q9BUE6	129 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	CHPF2	Q9P2E5	772 aa		11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	CNOT7	Q9UIV1	285 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-222	ENST00000482096	FAM205C	A6NFA0	338 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096		H7C1D1	291 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	HDGFL1	Q5TGJ6	251 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	GPIHBP1	Q8IV16	184 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	CCDC146	Q8IYE0	955 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	DPF2	Q92785	391 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	ADAM33	Q9BZ11	813 aa		11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	DBF4	Q9UBU7	674 aa	Predicted RBP	11.19	□□□□□ -0.62
UBE2F-222	ENST00000482096	ANKRD36C	Q5JPF3	1778 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	SHTN1	A0MZ66	631 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	CA12	O43570	354 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	PRKCSH	P14314	528 aa	Predicted RBP	11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	TRIM28	Q13263	835 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	WASHC4	Q2M389	1173 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	TSR1	Q2NL82	804 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	CELF1	Q92879	486 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	FBXW7	Q969H0	707 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	ZNF428	Q96B54	188 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	RUNDC1	Q96C34	613 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	FAM89A	Q96GI7	184 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	CDHR5	Q9HBB8	845 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	LAS1L	Q9Y4W2	734 aa	Known RBP	11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	TRPM7	Q96QT4	1865 aa		11.18	□□□□□ -0.62
UBE2F-222	ENST00000482096	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	DUOX1	Q9NRD9	1551 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	ATP5J2-PTCD1	G3V325	749 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	PSMD14	O00487	310 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	BRPF1	P55201	1214 aa	Predicted RBP	11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	USP48	Q86UV5	1035 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	ZNF408	Q9H9D4	720 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	HYPK	Q9NX55	129 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	POLL	Q9UGP5	575 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	TSKS	Q9UJT2	592 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	LAMB2	P55268	1798 aa		11.17	□□□□□ -0.62
UBE2F-222	ENST00000482096	C6orf229	H3BNL8	230 aa		11.16	□□□□□ -0.62
UBE2F-222	ENST00000482096	RPS12	P25398	132 aa	Known RBP	11.16	□□□□□ -0.62
UBE2F-222	ENST00000482096	GPSM2	P81274	684 aa		11.16	□□□□□ -0.62
UBE2F-222	ENST00000482096	DUSP27	Q5VZP5	1158 aa		11.16	□□□□□ -0.62
UBE2F-222	ENST00000482096	SAMD7	Q7Z3H4	446 aa		11.16	□□□□□ -0.62
UBE2F-222	ENST00000482096	DBNDD1	Q9H9R9	158 aa		11.16	□□□□□ -0.62
UBE2F-222	ENST00000482096	IRS4	O14654	1257 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	RGS19	P49795	217 aa		11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	HUNK	P57058	714 aa		11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	RPS8	P62241	208 aa	Known RBP	11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	NOG	Q13253	232 aa		11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	WDR43	Q15061	677 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	RTL5	Q5HYW3	569 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	EYA3	Q99504	573 aa		11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	ADAMTS8	Q9UP79	889 aa		11.15	□□□□□ -0.62
UBE2F-222	ENST00000482096	LRRC37A	A6NMS7	1700 aa		11.15	□□□□□ -0.63
UBE2F-222	ENST00000482096	CCDC85C	A6NKD9	419 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	ECE2	O60344	883 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	EGFR	P00533	1210 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	ZNF853	P0CG23	659 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	DDX10	Q13206	875 aa	Known RBP	11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	FAM161A	Q3B820	660 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	DLK2	Q6UY11	383 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	KRT26	Q7Z3Y9	468 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	TBC1D16	Q8TBP0	767 aa		11.14	□□□□□ -0.63
UBE2F-222	ENST00000482096	ZIC5	Q96T25	663 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms