RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 B4GALNT3Q6L9W6 998 aa25.5■■□□□ 1.67
VPS16-207ENST00000481812 EAF2Q96CJ1 260 aaPredicted RBP25.5■■□□□ 1.67
VPS16-207ENST00000481812 IL1RAPL2Q9NP60 686 aa25.5■■□□□ 1.67
VPS16-207ENST00000481812 ZBTB47Q9UFB7 747 aaPredicted RBP25.5■■□□□ 1.67
VPS16-207ENST00000481812 SBF1O95248 1867 aa25.49■■□□□ 1.67
VPS16-207ENST00000481812 CCDC88AQ3V6T2 1871 aa25.49■■□□□ 1.67
VPS16-207ENST00000481812 WTIPA6NIX2 430 aaPredicted RBP25.49■■□□□ 1.67
VPS16-207ENST00000481812 SNAP23O00161 211 aa25.49■■□□□ 1.67
VPS16-207ENST00000481812 TIMM10P62072 90 aa25.49■■□□□ 1.67
VPS16-207ENST00000481812 WASHC4Q2M389 1173 aa25.49■■□□□ 1.67
VPS16-207ENST00000481812 ARHGAP27Q6ZUM4 889 aa25.49■■□□□ 1.67
VPS16-207ENST00000481812 ZC3H12CQ9C0D7 883 aaKnown RBP25.49■■□□□ 1.67
VPS16-207ENST00000481812 ZBTB22O15209 634 aa25.48■■□□□ 1.67
VPS16-207ENST00000481812 KIAA2012Q0VF49 1180 aa25.48■■□□□ 1.67
VPS16-207ENST00000481812 DICER1Q9UPY3 1922 aaKnown RBP25.47■■□□□ 1.67
VPS16-207ENST00000481812 SMARCA5O60264 1052 aaPredicted RBP25.47■■□□□ 1.67
VPS16-207ENST00000481812 CHD1LQ86WJ1 897 aa25.47■■□□□ 1.67
VPS16-207ENST00000481812 FBXO33Q7Z6M2 555 aa25.46■■□□□ 1.67
VPS16-207ENST00000481812 AACSQ86V21 672 aa25.46■■□□□ 1.67
VPS16-207ENST00000481812 XAGE2Q96GT9 111 aa25.46■■□□□ 1.67
VPS16-207ENST00000481812 NEUROD6Q96NK8 337 aa25.46■■□□□ 1.67
VPS16-207ENST00000481812 DCAF8L1A6NGE4 600 aa25.45■■□□□ 1.66
VPS16-207ENST00000481812 IARSP41252 1262 aaKnown RBP25.45■■□□□ 1.66
VPS16-207ENST00000481812 CAVIN4Q5BKX8 364 aa25.45■■□□□ 1.66
VPS16-207ENST00000481812 TXNRD3Q86VQ6 643 aa25.45■■□□□ 1.66
VPS16-207ENST00000481812 FAM84BQ96KN1 310 aaPredicted RBP25.45■■□□□ 1.66
VPS16-207ENST00000481812 GTF3C3Q9Y5Q9 886 aa25.45■■□□□ 1.66
VPS16-207ENST00000481812 CHD4Q14839 1912 aa25.44■■□□□ 1.66
VPS16-207ENST00000481812 IFIT2P09913 472 aaKnown RBP25.44■■□□□ 1.66
VPS16-207ENST00000481812 ZNF804AQ7Z570 1209 aa25.44■■□□□ 1.66
VPS16-207ENST00000481812 ZNF277Q9NRM2 450 aaPredicted RBP25.44■■□□□ 1.66
VPS16-207ENST00000481812 DBNLQ9UJU6 430 aaKnown RBP25.44■■□□□ 1.66
VPS16-207ENST00000481812 PPIP5K2O43314 1243 aa25.43■■□□□ 1.66
VPS16-207ENST00000481812 LMNB1P20700 586 aa25.43■■□□□ 1.66
VPS16-207ENST00000481812 KLRK1P26718 216 aa25.43■■□□□ 1.66
VPS16-207ENST00000481812 HIBADHP31937 336 aaKnown RBP25.43■■□□□ 1.66
VPS16-207ENST00000481812 RASSF7Q02833 373 aa25.43■■□□□ 1.66
VPS16-207ENST00000481812 GPR101Q96P66 508 aaPredicted RBP25.43■■□□□ 1.66
VPS16-207ENST00000481812 DBNDD2Q9BQY9 259 aa25.43■■□□□ 1.66
VPS16-207ENST00000481812 COA1Q9GZY4 146 aa25.43■■□□□ 1.66
VPS16-207ENST00000481812 CCDC8Q9H0W5 538 aaPredicted RBP25.43■■□□□ 1.66
VPS16-207ENST00000481812 RIMBP2O15034 1052 aa25.42■■□□□ 1.66
VPS16-207ENST00000481812 ADORA1P30542 326 aa25.42■■□□□ 1.66
VPS16-207ENST00000481812 AOC3Q16853 763 aa25.42■■□□□ 1.66
VPS16-207ENST00000481812 ZNF512BQ96KM6 892 aaPredicted RBP25.42■■□□□ 1.66
VPS16-207ENST00000481812 LNPKQ9C0E8 428 aa25.42■■□□□ 1.66
VPS16-207ENST00000481812 GORABQ5T7V8 394 aa25.41■■□□□ 1.66
VPS16-207ENST00000481812 LARGE2Q8N3Y3 721 aa25.41■■□□□ 1.66
VPS16-207ENST00000481812 IL1R1P14778 569 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 GYG1P46976 350 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 PRELPP51888 382 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 CCDC158Q5M9N0 1113 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 CCDC102BQ68D86 513 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 PODNQ7Z5L7 613 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 VPS37DQ86XT2 251 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 CD209Q9NNX6 404 aa25.4■■□□□ 1.66
VPS16-207ENST00000481812 GNL3LQ9NVN8 582 aaKnown RBP25.4■■□□□ 1.66
VPS16-207ENST00000481812 TLR7Q9NYK1 1049 aaKnown RBP25.4■■□□□ 1.66
VPS16-207ENST00000481812 SALL3Q9BXA9 1300 aa25.39■■□□□ 1.66
VPS16-207ENST00000481812 BCAMP50895 628 aa25.39■■□□□ 1.66
VPS16-207ENST00000481812 TDRD7Q8NHU6 1098 aaKnown RBP25.39■■□□□ 1.66
VPS16-207ENST00000481812 MYH13Q9UKX3 1938 aa25.39■■□□□ 1.65
VPS16-207ENST00000481812 G3V3G9 751 aa25.38■■□□□ 1.65
VPS16-207ENST00000481812 SEMA3EO15041 775 aa25.38■■□□□ 1.65
VPS16-207ENST00000481812 UQCRFS1P1P0C7P4 283 aa25.38■■□□□ 1.65
VPS16-207ENST00000481812 ARID4AP29374 1257 aaPredicted RBP25.38■■□□□ 1.65
VPS16-207ENST00000481812 PHKA1P46020 1223 aa25.38■■□□□ 1.65
VPS16-207ENST00000481812 DCAF8Q5TAQ9 597 aa25.38■■□□□ 1.65
VPS16-207ENST00000481812 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
VPS16-207ENST00000481812 JDP2Q8WYK2 163 aa25.38■■□□□ 1.65
VPS16-207ENST00000481812 TTC41PQ6P2S7 1318 aa25.37■■□□□ 1.65
VPS16-207ENST00000481812 PSME4Q14997 1843 aa25.37■■□□□ 1.65
VPS16-207ENST00000481812 NIM1KQ8IY84 436 aa25.37■■□□□ 1.65
VPS16-207ENST00000481812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.37■■□□□ 1.65
VPS16-207ENST00000481812 GPATCH3Q96I76 525 aa25.37■■□□□ 1.65
VPS16-207ENST00000481812 STAP2Q9UGK3 403 aa25.37■■□□□ 1.65
VPS16-207ENST00000481812 COL4A5P29400 1685 aa25.36■■□□□ 1.65
VPS16-207ENST00000481812 AKAP11Q9UKA4 1901 aa25.36■■□□□ 1.65
VPS16-207ENST00000481812 ECE2O60344 883 aa25.36■■□□□ 1.65
VPS16-207ENST00000481812 ZNRF3Q9ULT6 936 aa25.36■■□□□ 1.65
VPS16-207ENST00000481812 MX1P20591 662 aa25.35■■□□□ 1.65
VPS16-207ENST00000481812 DOK7Q18PE1 504 aa25.35■■□□□ 1.65
VPS16-207ENST00000481812 TTC39AQ5SRH9 613 aa25.35■■□□□ 1.65
VPS16-207ENST00000481812 OSBPL3Q9H4L5 887 aa25.35■■□□□ 1.65
VPS16-207ENST00000481812 DBNDD1Q9H9R9 158 aa25.35■■□□□ 1.65
VPS16-207ENST00000481812 ECHDC1Q9NTX5 307 aa25.35■■□□□ 1.65
VPS16-207ENST00000481812 PDS5AQ29RF7 1337 aaKnown RBP25.35■■□□□ 1.65
VPS16-207ENST00000481812 ATP5JP18859 108 aa25.34■■□□□ 1.65
VPS16-207ENST00000481812 DENND2AQ9ULE3 1009 aa25.34■■□□□ 1.65
VPS16-207ENST00000481812 SCN9AQ15858 1988 aa25.34■■□□□ 1.65
VPS16-207ENST00000481812 AOX1Q06278 1338 aa25.34■■□□□ 1.65
VPS16-207ENST00000481812 ZC3H4Q9UPT8 1303 aaKnown RBP25.34■■□□□ 1.65
VPS16-207ENST00000481812 FZD9O00144 591 aa25.33■■□□□ 1.65
VPS16-207ENST00000481812 PDE4AP27815 886 aa25.33■■□□□ 1.65
VPS16-207ENST00000481812 PDE1AP54750 535 aa25.33■■□□□ 1.65
VPS16-207ENST00000481812 PLEKHM2Q8IWE5 1019 aa25.33■■□□□ 1.65
VPS16-207ENST00000481812 OTUD7AQ8TE49 926 aaPredicted RBP25.33■■□□□ 1.65
VPS16-207ENST00000481812 BCL11AQ9H165 835 aa25.33■■□□□ 1.65
VPS16-207ENST00000481812 RNF181Q9P0P0 153 aa25.33■■□□□ 1.65
VPS16-207ENST00000481812 FAM205AQ6ZU69 1335 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms