RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 MCM2P49736 904 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 DNAJC21Q5F1R6 531 aaKnown RBP13.12□□□□□ -0.31
TRIM27-205ENST00000481474 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
TRIM27-205ENST00000481474 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
TRIM27-205ENST00000481474 KIF4AO95239 1232 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 CASP2P42575 452 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
TRIM27-205ENST00000481474 IGBP1P78318 339 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 AMPD3Q01432 767 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 F6X3S4 739 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 YEATS4O95619 227 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
TRIM27-205ENST00000481474 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 SPC25Q9HBM1 224 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 TLDC2A0PJX2 215 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 MIPOL1Q8TD10 442 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 NSMCE1Q8WV22 266 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 XPAP23025 273 aaPredicted RBP13.11□□□□□ -0.31
TRIM27-205ENST00000481474 USH1GQ495M9 461 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
TRIM27-205ENST00000481474 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
TRIM27-205ENST00000481474 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 LDHCP07864 332 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
TRIM27-205ENST00000481474 RAPGEF1Q13905 1077 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 SARNPP82979 210 aaKnown RBP13.1□□□□□ -0.31
TRIM27-205ENST00000481474 PSMD2Q13200 908 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 ANXA1P04083 346 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 TRIM7Q9C029 511 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 STAT6P42226 847 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
TRIM27-205ENST00000481474 TRPC3Q13507 836 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 TAF7Q15545 349 aaPredicted RBP13.09□□□□□ -0.31
TRIM27-205ENST00000481474 HP1BP3Q5SSJ5 553 aaPredicted RBP13.09□□□□□ -0.31
TRIM27-205ENST00000481474 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 FAM204AQ9H8W3 233 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
TRIM27-205ENST00000481474 VIMP08670 466 aaKnown RBP13.09□□□□□ -0.31
TRIM27-205ENST00000481474 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
TRIM27-205ENST00000481474 C1orf228Q6PIY5 440 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 SLC4A4Q9Y6R1 1079 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 PPP1R7Q15435 360 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 SZRD1Q7Z422 152 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 ERMNQ8TAM6 284 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 CAPZA3Q96KX2 299 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 SOGA1O94964 1423 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 SEC62Q99442 399 aaKnown RBP13.09□□□□□ -0.31
TRIM27-205ENST00000481474 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
TRIM27-205ENST00000481474 MICALCLQ6ZW33 695 aa13.08□□□□□ -0.31
TRIM27-205ENST00000481474 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.31
TRIM27-205ENST00000481474 MNAT1P51948 309 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 IRX3P78415 501 aaPredicted RBP13.08□□□□□ -0.32
TRIM27-205ENST00000481474 CCDC12Q8WUD4 166 aaPredicted RBP13.08□□□□□ -0.32
TRIM27-205ENST00000481474 YIPF2Q9BWQ6 316 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 MCM7P33993 719 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 TMC6Q7Z403 805 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 AAMPQ13685 434 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 SPECC1LQ69YQ0 1117 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
TRIM27-205ENST00000481474 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 SH2D4BQ5SQS7 431 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 TTC22Q5TAA0 569 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
TRIM27-205ENST00000481474 USP25Q9UHP3 1055 aa13.08□□□□□ -0.32
TRIM27-205ENST00000481474 APBA3O96018 575 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 HS1BP3Q53T59 392 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 CDC26Q8NHZ8 85 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 CCDC110Q8TBZ0 833 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 PNISRQ8TF01 805 aaKnown RBP13.07□□□□□ -0.32
TRIM27-205ENST00000481474 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
TRIM27-205ENST00000481474 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 NLRP3Q96P20 1036 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 TAB3Q8N5C8 712 aaPredicted RBP13.07□□□□□ -0.32
TRIM27-205ENST00000481474 PPP1R16BQ96T49 567 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 RRAGBQ5VZM2 374 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 CCDC125Q86Z20 511 aa13.07□□□□□ -0.32
TRIM27-205ENST00000481474 DPY19L2Q6NUT2 758 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 SYCE3A1L190 88 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 AGRPO00253 132 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 MAP9Q49MG5 647 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 ABI1Q8IZP0 508 aa13.06□□□□□ -0.32
TRIM27-205ENST00000481474 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms