RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 DZIP1LQ8IYY4 767 aaKnown RBP6.65□□□□□ -1.34
CBX3-207ENST00000481300 TMEM130Q8N3G9 435 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 NUDT16Q96DE0 195 aaKnown RBP6.65□□□□□ -1.34
CBX3-207ENST00000481300 MRPL18Q9H0U6 180 aaKnown RBP6.65□□□□□ -1.34
CBX3-207ENST00000481300 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 SRA1Q9HD15 236 aaKnown RBP6.65□□□□□ -1.34
CBX3-207ENST00000481300 TMEM63CQ9P1W3 806 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 BRPF3Q9ULD4 1205 aa6.65□□□□□ -1.34
CBX3-207ENST00000481300 TM4SF5O14894 197 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 PCSK2P16519 638 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 ARTNQ5T4W7 220 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 CEP135Q66GS9 1140 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 MAP4K3Q8IVH8 894 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 CACTIN-AS1Q8N1I8 211 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 GALNT11Q8NCW6 608 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 TTC16Q8NEE8 873 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 LACRTQ9GZZ8 138 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 RASSF4Q9H2L5 321 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 ELP3Q9H9T3 547 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 DCTN4Q9UJW0 460 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 PPME1Q9Y570 386 aa6.64□□□□□ -1.35
CBX3-207ENST00000481300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.64□□□□□ -1.35
CBX3-207ENST00000481300 LINC01387J3KSC0 135 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 DNM1Q05193 864 aaKnown RBP6.63□□□□□ -1.35
CBX3-207ENST00000481300 ECM1Q16610 540 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 PDE12Q6L8Q7 609 aaKnown RBP6.63□□□□□ -1.35
CBX3-207ENST00000481300 TXNDC11Q6PKC3 985 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 Q6ZS46 218 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.35
CBX3-207ENST00000481300 CEP120Q8N960 986 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 TMC1Q8TDI8 760 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 SPACA7Q96KW9 195 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 MUC3BQ9H195 1237 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 ZFP64Q9NPA5 681 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 CNTN3Q9P232 1028 aa6.63□□□□□ -1.35
CBX3-207ENST00000481300 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
CBX3-207ENST00000481300 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
CBX3-207ENST00000481300 ZSCAN29Q8IWY8 852 aaPredicted RBP6.62□□□□□ -1.35
CBX3-207ENST00000481300 EDEM1Q92611 657 aa6.62□□□□□ -1.35
CBX3-207ENST00000481300 PBX4Q9BYU1 374 aa6.62□□□□□ -1.35
CBX3-207ENST00000481300 KANSL3Q9P2N6 904 aa6.62□□□□□ -1.35
CBX3-207ENST00000481300 A6NHS1 94 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 WISP1O95388 367 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 MZF1P28698 734 aaPredicted RBP6.61□□□□□ -1.35
CBX3-207ENST00000481300 CDC27P30260 824 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 USP5P45974 858 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.61□□□□□ -1.35
CBX3-207ENST00000481300 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 NCAPG2Q86XI2 1143 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 DCAF11Q8TEB1 546 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 GGNBP2Q9H3C7 697 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 KCNK4Q9NYG8 393 aa6.61□□□□□ -1.35
CBX3-207ENST00000481300 FZD6O60353 706 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 PDGFAP04085 211 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 RPLP1P05386 114 aaKnown RBP6.6□□□□□ -1.35
CBX3-207ENST00000481300 ACPPP15309 386 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 ERCC3P19447 782 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 EPHA1P21709 976 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 CDC25BP30305 580 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 CD68P34810 354 aaPredicted RBP6.6□□□□□ -1.35
CBX3-207ENST00000481300 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 LRP8Q14114 963 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 XKR5Q6UX68 686 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 C1orf127Q8N9H9 656 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 CITED4Q96RK1 184 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 POP1Q99575 1024 aaKnown RBP6.6□□□□□ -1.35
CBX3-207ENST00000481300 CARD10Q9BWT7 1032 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
CBX3-207ENST00000481300 SALL4Q9UJQ4 1053 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
CBX3-207ENST00000481300 C8orf34Q49A92 452 aa6.59□□□□□ -1.35
CBX3-207ENST00000481300 UBL7Q96S82 380 aaPredicted RBP6.59□□□□□ -1.35
CBX3-207ENST00000481300 RBCK1Q9BYM8 510 aa6.59□□□□□ -1.35
CBX3-207ENST00000481300 NFKBIEO00221 500 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 FSCN2O14926 492 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 HYAL3O43820 417 aaPredicted RBP6.58□□□□□ -1.36
CBX3-207ENST00000481300 GLB1P16278 677 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 EHHADHQ08426 723 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 ASB16Q96NS5 453 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 ADAM19Q9H013 955 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 CHRDQ9H2X0 955 aa6.58□□□□□ -1.36
CBX3-207ENST00000481300 ANKRD33BA6NCL7 494 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
CBX3-207ENST00000481300 ADAM11O75078 769 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 TRPA1O75762 1119 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 PTPRAP18433 802 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 FSTP19883 344 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 CES1P23141 567 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 DNAJC14Q6Y2X3 702 aaPredicted RBP6.57□□□□□ -1.36
CBX3-207ENST00000481300 KIAA1211Q6ZU35 1233 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 ACAD11Q709F0 780 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 TMC7Q7Z402 723 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 FOXD4L4Q8WXT5 416 aaPredicted RBP6.57□□□□□ -1.36
CBX3-207ENST00000481300 DMRTB1Q96MA1 342 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 HHIPQ96QV1 700 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 DZANK1Q9NVP4 752 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 RNF112Q9ULX5 631 aa6.57□□□□□ -1.36
CBX3-207ENST00000481300 GJD3Q8N144 294 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms