RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 MAP2K3P46734 347 aa10.76□□□□□ -0.69
CBX3-206ENST00000481057 SRSF11Q05519 484 aaKnown RBP10.76□□□□□ -0.69
CBX3-206ENST00000481057 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
CBX3-206ENST00000481057 CCINQ13939 588 aa10.76□□□□□ -0.69
CBX3-206ENST00000481057 GSX2Q9BZM3 304 aa10.76□□□□□ -0.69
CBX3-206ENST00000481057 XYLBO75191 536 aa10.75□□□□□ -0.69
CBX3-206ENST00000481057 AFAP1Q8N556 730 aa10.75□□□□□ -0.69
CBX3-206ENST00000481057 BRPF3Q9ULD4 1205 aa10.75□□□□□ -0.69
CBX3-206ENST00000481057 XIRP1Q702N8 1843 aaKnown RBP10.74□□□□□ -0.69
CBX3-206ENST00000481057 GOLGA3Q08378 1498 aa10.74□□□□□ -0.69
CBX3-206ENST00000481057 NDUFB5O43674 189 aa10.74□□□□□ -0.69
CBX3-206ENST00000481057 PCSK2P16519 638 aa10.74□□□□□ -0.69
CBX3-206ENST00000481057 ZNF468Q5VIY5 522 aaPredicted RBP10.74□□□□□ -0.69
CBX3-206ENST00000481057 RAB44Q7Z6P3 723 aaPredicted RBP10.74□□□□□ -0.69
CBX3-206ENST00000481057 FAM9AQ8IZU1 332 aaPredicted RBP10.74□□□□□ -0.69
CBX3-206ENST00000481057 GJD3Q8N144 294 aa10.74□□□□□ -0.69
CBX3-206ENST00000481057 PRR12Q9ULL5 1215 aa10.74□□□□□ -0.69
CBX3-206ENST00000481057 ADAMTS2O95450 1211 aa10.73□□□□□ -0.69
CBX3-206ENST00000481057 RPLP1P05386 114 aaKnown RBP10.73□□□□□ -0.69
CBX3-206ENST00000481057 ARAFP10398 606 aa10.73□□□□□ -0.69
CBX3-206ENST00000481057 USP5P45974 858 aa10.73□□□□□ -0.69
CBX3-206ENST00000481057 EFCC1Q9HA90 598 aa10.73□□□□□ -0.69
CBX3-206ENST00000481057 AVENQ9NQS1 362 aaPredicted RBP10.73□□□□□ -0.69
CBX3-206ENST00000481057 DCTN4Q9UJW0 460 aa10.73□□□□□ -0.69
CBX3-206ENST00000481057 FNDC3AQ9Y2H6 1198 aaKnown RBP10.73□□□□□ -0.69
CBX3-206ENST00000481057 FGD6Q6ZV73 1430 aa10.73□□□□□ -0.69
CBX3-206ENST00000481057 DEFB132Q7Z7B7 95 aa10.72□□□□□ -0.69
CBX3-206ENST00000481057 BHMTQ93088 406 aa10.72□□□□□ -0.69
CBX3-206ENST00000481057 GGNBP2Q9H3C7 697 aa10.72□□□□□ -0.69
CBX3-206ENST00000481057 ZNF518AQ6AHZ1 1483 aa10.72□□□□□ -0.69
CBX3-206ENST00000481057 WIPF1O43516 503 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 NFKB1P19838 968 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 IQGAP1P46940 1657 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 NWD1Q149M9 1564 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 BCL9LQ86UU0 1499 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 PNMA5Q96PV4 448 aa10.71□□□□□ -0.69
CBX3-206ENST00000481057 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.71□□□□□ -0.69
CBX3-206ENST00000481057 COL16A1Q07092 1604 aaPredicted RBP10.7□□□□□ -0.7
CBX3-206ENST00000481057 ABCA6Q8N139 1617 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 KDM5CP41229 1560 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 PLEKHD1A6NEE1 506 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 SASH3O75995 380 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 CITED4Q96RK1 184 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 OXCT2Q9BYC2 517 aaPredicted RBP10.7□□□□□ -0.7
CBX3-206ENST00000481057 RBCK1Q9BYM8 510 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 ZFATQ9P243 1243 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 KLF15Q9UIH9 416 aa10.7□□□□□ -0.7
CBX3-206ENST00000481057 DEPDC5O75140 1603 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 ABCC1P33527 1531 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 PLCH2O75038 1416 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 A6NHS1 94 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 SIN3BO75182 1162 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 TARSP26639 723 aaKnown RBP10.69□□□□□ -0.7
CBX3-206ENST00000481057 ADH6P28332 368 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 MAPK1P28482 360 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 PCBP4P57723 403 aaKnown RBP10.69□□□□□ -0.7
CBX3-206ENST00000481057 C8orf34Q49A92 452 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 PDE12Q6L8Q7 609 aaKnown RBP10.69□□□□□ -0.7
CBX3-206ENST00000481057 NLRP13Q86W25 1043 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 ACDQ96AP0 544 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 FAM129BQ96TA1 746 aa10.69□□□□□ -0.7
CBX3-206ENST00000481057 LRRC9Q6ZRR7 1453 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 MAP3K6O95382 1288 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 RARAP10276 462 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 EHHADHQ08426 723 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 ZNF438Q7Z4V0 828 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 THEMISQ8N1K5 641 aaPredicted RBP10.68□□□□□ -0.7
CBX3-206ENST00000481057 TTC16Q8NEE8 873 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 GGA1Q9UJY5 639 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 GDF2Q9UK05 429 aaPredicted RBP10.68□□□□□ -0.7
CBX3-206ENST00000481057 CLTCQ00610 1675 aaKnown RBP10.68□□□□□ -0.7
CBX3-206ENST00000481057 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
CBX3-206ENST00000481057 NEURL1BA8MQ27 555 aa10.67□□□□□ -0.7
CBX3-206ENST00000481057 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
CBX3-206ENST00000481057 XKR5Q6UX68 686 aa10.67□□□□□ -0.7
CBX3-206ENST00000481057 SLCO4C1Q6ZQN7 724 aa10.67□□□□□ -0.7
CBX3-206ENST00000481057 GOLGA6L1Q8N7Z2 621 aa10.67□□□□□ -0.7
CBX3-206ENST00000481057 IGHA2P01877 340 aa10.66□□□□□ -0.7
CBX3-206ENST00000481057 PDE3BQ13370 1112 aa10.66□□□□□ -0.7
CBX3-206ENST00000481057 FCHSD1Q86WN1 690 aa10.66□□□□□ -0.7
CBX3-206ENST00000481057 C8orf37Q96NL8 207 aa10.66□□□□□ -0.7
CBX3-206ENST00000481057 ELP3Q9H9T3 547 aa10.66□□□□□ -0.7
CBX3-206ENST00000481057 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
CBX3-206ENST00000481057 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
CBX3-206ENST00000481057 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.7
CBX3-206ENST00000481057 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
CBX3-206ENST00000481057 TNFRSF25Q93038 417 aa10.65□□□□□ -0.7
CBX3-206ENST00000481057 MDFIQ99750 246 aa10.65□□□□□ -0.7
CBX3-206ENST00000481057 SHPRHQ149N8 1683 aa10.65□□□□□ -0.7
CBX3-206ENST00000481057 TMEM94Q12767 1356 aa10.65□□□□□ -0.71
CBX3-206ENST00000481057 MLH3Q9UHC1 1453 aa10.64□□□□□ -0.71
CBX3-206ENST00000481057 GPR182O15218 404 aa10.64□□□□□ -0.71
CBX3-206ENST00000481057 MMP20O60882 483 aa10.64□□□□□ -0.71
CBX3-206ENST00000481057 PRELPP51888 382 aa10.64□□□□□ -0.71
CBX3-206ENST00000481057 CCDC27Q2M243 656 aa10.64□□□□□ -0.71
CBX3-206ENST00000481057 ABI2Q9NYB9 513 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms