RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 MYCLP1P12525 358 aaPredicted RBP10.21□□□□□ -0.78
LSM5-210ENST00000480956 COPB2P35606 906 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 ZAP70P43403 619 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 STAG2Q8N3U4 1231 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 TTC16Q8NEE8 873 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 E2F7Q96AV8 911 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 MFSD3Q96ES6 412 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 PLA2G2EQ9NZK7 142 aa10.21□□□□□ -0.78
LSM5-210ENST00000480956 EPB41L2O43491 1005 aaKnown RBP10.2□□□□□ -0.78
LSM5-210ENST00000480956 SOX5P35711 763 aa10.2□□□□□ -0.78
LSM5-210ENST00000480956 C8orf34Q49A92 452 aa10.2□□□□□ -0.78
LSM5-210ENST00000480956 TM4SF20Q53R12 229 aa10.2□□□□□ -0.78
LSM5-210ENST00000480956 EPS8L3Q8TE67 593 aaKnown RBP10.2□□□□□ -0.78
LSM5-210ENST00000480956 ZNF296Q8WUU4 475 aaPredicted RBP10.2□□□□□ -0.78
LSM5-210ENST00000480956 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
LSM5-210ENST00000480956 MRPS23Q9Y3D9 190 aaKnown RBP10.2□□□□□ -0.78
LSM5-210ENST00000480956 TRAPPC10P48553 1259 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 POU5F1Q01860 360 aaKnown RBP10.19□□□□□ -0.78
LSM5-210ENST00000480956 C21orf62-AS1Q17RA5 79 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 PCNX4Q63HM2 1172 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 CCDC174Q6PII3 467 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 CCDC74AQ96AQ1 378 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 NT5C1AQ9BXI3 368 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 CDV3Q9UKY7 258 aaKnown RBP10.19□□□□□ -0.78
LSM5-210ENST00000480956 CCDC163A0A0D9SF12 145 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 GBP2P32456 591 aaPredicted RBP10.19□□□□□ -0.78
LSM5-210ENST00000480956 IRS1P35568 1242 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 GUCY2FP51841 1108 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 GDF10P55107 478 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 KCNC4Q03721 635 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 FAM160A2Q8N612 972 aaPredicted RBP10.19□□□□□ -0.78
LSM5-210ENST00000480956 JMYQ8N9B5 988 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 C1orf131Q8NDD1 294 aaKnown RBP10.19□□□□□ -0.78
LSM5-210ENST00000480956 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 SHDQ96IW2 340 aa10.19□□□□□ -0.78
LSM5-210ENST00000480956 KDM2BQ8NHM5 1336 aa10.18□□□□□ -0.78
LSM5-210ENST00000480956 F6X3S4 739 aa10.18□□□□□ -0.78
LSM5-210ENST00000480956 MORC3Q14149 939 aa10.18□□□□□ -0.78
LSM5-210ENST00000480956 ACBD5Q5T8D3 534 aaPredicted RBP10.18□□□□□ -0.78
LSM5-210ENST00000480956 ETFBKMTQ8IXQ9 262 aa10.18□□□□□ -0.78
LSM5-210ENST00000480956 ARHGEF10LQ9HCE6 1279 aa10.18□□□□□ -0.78
LSM5-210ENST00000480956 ACTR10Q9NZ32 417 aa10.18□□□□□ -0.78
LSM5-210ENST00000480956 AKAP10O43572 662 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 SCNN1DP51172 638 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 USPL1Q5W0Q7 1092 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 WWC2Q6AWC2 1192 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 NIM1KQ8IY84 436 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 SERTAD1Q9UHV2 236 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 KLF15Q9UIH9 416 aa10.17□□□□□ -0.78
LSM5-210ENST00000480956 NEK2P51955 445 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 ERFEQ4G0M1 354 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 TEX19Q8NA77 164 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 ATL2Q8NHH9 583 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 NINJ1Q92982 152 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
LSM5-210ENST00000480956 TMEM74Q96NL1 305 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 TAGLN3Q9UI15 199 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 TIMM44O43615 452 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 LDHCP07864 332 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 IFIT2P09913 472 aaKnown RBP10.16□□□□□ -0.78
LSM5-210ENST00000480956 VARSP26640 1264 aaKnown RBP10.16□□□□□ -0.78
LSM5-210ENST00000480956 TBCELQ5QJ74 424 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 ICE2Q659A1 982 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 NXPE4Q6UWF7 544 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 CCDC81Q6ZN84 652 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 SH3RF1Q7Z6J0 888 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
LSM5-210ENST00000480956 PTPRHQ9HD43 1115 aa10.16□□□□□ -0.78
LSM5-210ENST00000480956 TPX2Q9ULW0 747 aaKnown RBP10.16□□□□□ -0.78
LSM5-210ENST00000480956 GOLGA6CA6NDK9 693 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 GOLGA6BA6NDN3 693 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 NEFMP07197 916 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 GOLGA6DP0CG33 693 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 RINLQ6ZS11 566 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 HDGFL2Q7Z4V5 671 aaPredicted RBP10.15□□□□□ -0.78
LSM5-210ENST00000480956 CXorf38Q8TB03 319 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 ASPSCR1Q9BZE9 553 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 AS3MTQ9HBK9 375 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 GOLGA6AQ9NYA3 693 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 PFDN2Q9UHV9 154 aa10.15□□□□□ -0.78
LSM5-210ENST00000480956 IRS4O14654 1257 aaPredicted RBP10.14□□□□□ -0.79
LSM5-210ENST00000480956 KATNA1O75449 491 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 MYL3P08590 195 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 FAM163BP0C2L3 166 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 SEPT6Q14141 434 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 UBR7Q8N806 425 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 FAM169BQ8N8A8 192 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 GGNBP2Q9H3C7 697 aa10.14□□□□□ -0.79
LSM5-210ENST00000480956 SUPT16HQ9Y5B9 1047 aaKnown RBP10.14□□□□□ -0.79
LSM5-210ENST00000480956 A6NHS1 94 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 PDE8AO60658 829 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 SCTRP47872 440 aa10.13□□□□□ -0.79
LSM5-210ENST00000480956 PSMA6P60900 246 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms