RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
SNRNP200-205ENST00000480835 STYK1Q6J9G0 422 aa17.92■□□□□ 0.46
SNRNP200-205ENST00000480835 C22orf23Q9BZE7 217 aa17.92■□□□□ 0.46
SNRNP200-205ENST00000480835 GNL3LQ9NVN8 582 aaKnown RBP17.92■□□□□ 0.46
SNRNP200-205ENST00000480835 RAD50Q92878 1312 aa17.92■□□□□ 0.46
SNRNP200-205ENST00000480835 C10orf71Q711Q0 1435 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 H0YIN7 160 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 GOLIM4O00461 696 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 PPEF1O14829 653 aaPredicted RBP17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 ATP2B4P23634 1241 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 TTF1Q15361 905 aaPredicted RBP17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 C2CD5Q86YS7 1000 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 ZNF804BA4D1E1 1349 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 KIF13BQ9NQT8 1826 aa17.91■□□□□ 0.46
SNRNP200-205ENST00000480835 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 DLEC1Q9Y238 1755 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 SNAP23O00161 211 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 SGSM2O43147 1006 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 MCAMP43121 646 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 C15orf52Q6ZUT6 534 aaKnown RBP17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 MTFR1LQ9H019 292 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 PODXL2Q9NZ53 605 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
SNRNP200-205ENST00000480835 CACNA1SQ13698 1873 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 SEMA3EO15041 775 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 ZFYP08048 801 aaPredicted RBP17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 ZAP70P43403 619 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 RBM25P49756 843 aaKnown RBP17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 FKBP4Q02790 459 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 SCARF1Q14162 830 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 FBXO33Q7Z6M2 555 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 EDC3Q96F86 508 aaKnown RBP17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 USP26Q9BXU7 913 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 LTBP1Q14766 1721 aa17.89■□□□□ 0.45
SNRNP200-205ENST00000480835 BCAMP50895 628 aa17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 CWC27Q6UX04 472 aaKnown RBP17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 SPATA5Q8NB90 893 aa17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 NDUFB9Q9Y6M9 179 aa17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 DOCK2Q92608 1830 aa17.88■□□□□ 0.45
SNRNP200-205ENST00000480835 POLD1P28340 1107 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 GPSM2P81274 684 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 RASGRF1Q13972 1273 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 VPS37DQ86XT2 251 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 FAM84BQ96KN1 310 aaPredicted RBP17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.87■□□□□ 0.451e-6■□□□□ 10.2
SNRNP200-205ENST00000480835 SNRKQ9NRH2 765 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 HMG20BQ9P0W2 317 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 GGA1Q9UJY5 639 aa17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 PDS5AQ29RF7 1337 aaKnown RBP17.87■□□□□ 0.45
SNRNP200-205ENST00000480835 HIBADHP31937 336 aaKnown RBP17.86■□□□□ 0.45
SNRNP200-205ENST00000480835 GYG1P46976 350 aa17.86■□□□□ 0.45
SNRNP200-205ENST00000480835 KIAA1211Q6ZU35 1233 aa17.86■□□□□ 0.45
SNRNP200-205ENST00000480835 DENND2AQ9ULE3 1009 aa17.86■□□□□ 0.45
SNRNP200-205ENST00000480835 IRS2Q9Y4H2 1338 aa17.86■□□□□ 0.45
SNRNP200-205ENST00000480835 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 UFL1O94874 794 aa17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 CYP2E1P05181 493 aaPredicted RBP17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 R3HDM1Q15032 1099 aaKnown RBP17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 DDRGK1Q96HY6 314 aa17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 ANTXR1Q9H6X2 564 aa17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 ANO2Q9NQ90 1003 aa17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 HELLSQ9NRZ9 838 aa17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 NSFL1CQ9UNZ2 370 aaKnown RBP17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 MYO5AQ9Y4I1 1855 aaKnown RBP17.85■□□□□ 0.45
SNRNP200-205ENST00000480835 SLX4Q8IY92 1834 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 MED23Q9ULK4 1368 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 ZBTB7AO95365 584 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 MCCP23508 829 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 ZMYM1Q5SVZ6 1142 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 CC2D2BQ6DHV5 1058 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 PI16Q6UXB8 463 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 ZNF804AQ7Z570 1209 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 FAM227BQ96M60 508 aa17.84■□□□□ 0.45
SNRNP200-205ENST00000480835 A0A0D9SFI3 127 aa17.83■□□□□ 0.44
SNRNP200-205ENST00000480835 WTIPA6NIX2 430 aaPredicted RBP17.83■□□□□ 0.44
SNRNP200-205ENST00000480835 IGSF3O75054 1194 aa17.83■□□□□ 0.44
SNRNP200-205ENST00000480835 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.44
SNRNP200-205ENST00000480835 TBC1D16Q8TBP0 767 aa17.83■□□□□ 0.44
SNRNP200-205ENST00000480835 KLRK1P26718 216 aa17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 MAP3K12Q12852 859 aa17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 GRIPAP1Q4V328 841 aa17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 MPNDQ8N594 471 aa17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 LSG1Q9H089 658 aaKnown RBP17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 IL25Q9H293 177 aa17.82■□□□□ 0.44
SNRNP200-205ENST00000480835 FRAT2O75474 233 aaPredicted RBP17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 CHRNA5P30532 468 aa17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 TGFB2P61812 414 aa17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 APPBP2Q92624 585 aa17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 PIH1D3Q9NQM4 214 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms