RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
CCM2-213ENST00000480658 KRT26Q7Z3Y9 468 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 ZNF804AQ7Z570 1209 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 TRPM4Q8TD43 1214 aa14.43□□□□□ -0.1
CCM2-213ENST00000480658 UTYO14607 1347 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 CTCFP49711 727 aaPredicted RBP14.42□□□□□ -0.1
CCM2-213ENST00000480658 FOXO4P98177 505 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 TBC1D10BQ4KMP7 808 aaPredicted RBP14.42□□□□□ -0.1
CCM2-213ENST00000480658 LMBR1LQ6UX01 489 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 SAMD7Q7Z3H4 446 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 SAPCD2Q86UD0 394 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 MYOZ2Q9NPC6 264 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 CNNM1Q9NRU3 951 aa14.42□□□□□ -0.1
CCM2-213ENST00000480658 HIRAP54198 1017 aaPredicted RBP14.41□□□□□ -0.1
CCM2-213ENST00000480658 FKBP1BP68106 108 aa14.41□□□□□ -0.1
CCM2-213ENST00000480658 CST9Q5W186 159 aa14.41□□□□□ -0.1
CCM2-213ENST00000480658 MRPL50Q8N5N7 158 aaKnown RBP14.41□□□□□ -0.1
CCM2-213ENST00000480658 C2orf69Q8N8R5 385 aa14.41□□□□□ -0.1
CCM2-213ENST00000480658 CAPNS2Q96L46 248 aa14.41□□□□□ -0.1
CCM2-213ENST00000480658 GPR101Q96P66 508 aaPredicted RBP14.41□□□□□ -0.1
CCM2-213ENST00000480658 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
CCM2-213ENST00000480658 PRDM10Q9NQV6 1147 aa14.41□□□□□ -0.1
CCM2-213ENST00000480658 MROH5Q6ZUA9 1318 aa14.41□□□□□ -0.1
CCM2-213ENST00000480658 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
CCM2-213ENST00000480658 TRAF5O00463 557 aa14.4□□□□□ -0.1
CCM2-213ENST00000480658 FKBP1AP62942 108 aaKnown RBP14.4□□□□□ -0.1
CCM2-213ENST00000480658 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
CCM2-213ENST00000480658 GGA3Q9NZ52 723 aa14.4□□□□□ -0.1
CCM2-213ENST00000480658 KIF16BQ96L93 1317 aa14.4□□□□□ -0.1
CCM2-213ENST00000480658 NF2P35240 595 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
CCM2-213ENST00000480658 NOGQ13253 232 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 DACT2Q5SW24 774 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 TTLL5Q6EMB2 1281 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
CCM2-213ENST00000480658 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 CCDC102AQ96A19 550 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 GMLQ99445 158 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
CCM2-213ENST00000480658 SCN9AQ15858 1988 aa14.38□□□□□ -0.11
CCM2-213ENST00000480658 MYO1BO43795 1136 aa14.38□□□□□ -0.11
CCM2-213ENST00000480658 UBE4AQ14139 1066 aa14.38□□□□□ -0.11
CCM2-213ENST00000480658 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
CCM2-213ENST00000480658 RBM26Q5T8P6 1007 aaKnown RBP14.38□□□□□ -0.11
CCM2-213ENST00000480658 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
CCM2-213ENST00000480658 TRMT2AQ8IZ69 625 aaKnown RBP14.38□□□□□ -0.11
CCM2-213ENST00000480658 SSH1Q8WYL5 1049 aa14.38□□□□□ -0.11
CCM2-213ENST00000480658 API5Q9BZZ5 524 aaKnown RBP14.38□□□□□ -0.11
CCM2-213ENST00000480658 GBA2Q9HCG7 927 aaPredicted RBP14.38□□□□□ -0.11
CCM2-213ENST00000480658 KCNQ5Q9NR82 932 aa14.38□□□□□ -0.11
CCM2-213ENST00000480658 PCNTO95613 3336 aa14.37□□□□□ -0.11
CCM2-213ENST00000480658 IL1R1P14778 569 aa14.37□□□□□ -0.11
CCM2-213ENST00000480658 HUNKP57058 714 aa14.37□□□□□ -0.11
CCM2-213ENST00000480658 SCARF1Q14162 830 aa14.37□□□□□ -0.11
CCM2-213ENST00000480658 APOBEC3FQ8IUX4 373 aaKnown RBP14.37□□□□□ -0.11
CCM2-213ENST00000480658 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
CCM2-213ENST00000480658 CD209Q9NNX6 404 aa14.37□□□□□ -0.11
CCM2-213ENST00000480658 NBPF7P0C2Y1 421 aaPredicted RBP14.36□□□□□ -0.11
CCM2-213ENST00000480658 ANGEL2Q5VTE6 544 aaKnown RBP14.36□□□□□ -0.11
CCM2-213ENST00000480658 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
CCM2-213ENST00000480658 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
CCM2-213ENST00000480658 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
CCM2-213ENST00000480658 PAPPA2Q9BXP8 1791 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 SHTN1A0MZ66 631 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 CAVIN4Q5BKX8 364 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 RGMBQ6NW40 437 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 VPS37DQ86XT2 251 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 PPP2R3BQ9Y5P8 575 aa14.35□□□□□ -0.11
CCM2-213ENST00000480658 FOXN1O15353 648 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
CCM2-213ENST00000480658 TAF5LO75529 589 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 SASH1O94885 1247 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 EGFRP00533 1210 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 GTF2IP78347 998 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 GRM1Q13255 1194 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
CCM2-213ENST00000480658 MTMR14Q8NCE2 650 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 CDCA5Q96FF9 252 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 SUCLG2Q96I99 432 aa14.34□□□□□ -0.11
CCM2-213ENST00000480658 BICC1Q9H694 974 aaKnown RBP14.34□□□□□ -0.11
CCM2-213ENST00000480658 ADM5C9JUS6 153 aa14.33□□□□□ -0.12
CCM2-213ENST00000480658 WNT10BO00744 389 aa14.33□□□□□ -0.12
CCM2-213ENST00000480658 UBTFL1P0CB47 393 aaPredicted RBP14.33□□□□□ -0.12
CCM2-213ENST00000480658 HIBADHP31937 336 aaKnown RBP14.33□□□□□ -0.12
CCM2-213ENST00000480658 EPHA10Q5JZY3 1008 aa14.33□□□□□ -0.12
CCM2-213ENST00000480658 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
CCM2-213ENST00000480658 TBC1D22AQ8WUA7 517 aa14.33□□□□□ -0.12
CCM2-213ENST00000480658 IRS2Q9Y4H2 1338 aa14.33□□□□□ -0.12
CCM2-213ENST00000480658 ZNF646O15015 1829 aaPredicted RBP14.32□□□□□ -0.12
CCM2-213ENST00000480658 TNFAIP1Q13829 316 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 DLGAP5Q15398 846 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 METTL24Q5JXM2 366 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 KIAA0825Q8IV33 1275 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 FAM205AQ6ZU69 1335 aa14.32□□□□□ -0.12
CCM2-213ENST00000480658 UNCXA6NJT0 531 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms