RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 SCNN1DP51172 638 aa15.03■□□□□ -0
CCM2-212ENST00000480382 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
CCM2-212ENST00000480382 PDE3AQ14432 1141 aa15.03■□□□□ -0
CCM2-212ENST00000480382 TNIP1Q15025 636 aa15.03■□□□□ -0
CCM2-212ENST00000480382 ATG9AQ7Z3C6 839 aa15.03■□□□□ -0
CCM2-212ENST00000480382 C16orf71Q8IYS4 520 aaPredicted RBP15.03■□□□□ -0
CCM2-212ENST00000480382 DDX19BQ9UMR2 479 aa15.03■□□□□ -0
CCM2-212ENST00000480382 CIAO1O76071 339 aa15.02■□□□□ -0
CCM2-212ENST00000480382 GMPSP49915 693 aaPredicted RBP15.02■□□□□ -0
CCM2-212ENST00000480382 UBE4AQ14139 1066 aa15.02■□□□□ -0
CCM2-212ENST00000480382 C15orf52Q6ZUT6 534 aaKnown RBP15.02■□□□□ -0
CCM2-212ENST00000480382 COA1Q9GZY4 146 aa15.02■□□□□ -0
CCM2-212ENST00000480382 TAF1DQ9H5J8 278 aaPredicted RBP15.02■□□□□ -0
CCM2-212ENST00000480382 COPRSQ9NQ92 184 aa15.02■□□□□ -0
CCM2-212ENST00000480382 HACL1Q9UJ83 578 aa15.02■□□□□ -0
CCM2-212ENST00000480382 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
CCM2-212ENST00000480382 PDE8BO95263 885 aa15.01□□□□□ -0.01
CCM2-212ENST00000480382 LMOD1P29536 600 aaPredicted RBP15.01□□□□□ -0.01
CCM2-212ENST00000480382 PODNQ7Z5L7 613 aa15.01□□□□□ -0.01
CCM2-212ENST00000480382 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
CCM2-212ENST00000480382 TOMM70O94826 608 aa15□□□□□ -0.01
CCM2-212ENST00000480382 POTEIP0CG38 1075 aa15□□□□□ -0.01
CCM2-212ENST00000480382 POTEJP0CG39 1038 aa15□□□□□ -0.01
CCM2-212ENST00000480382 EPHX2P34913 555 aa15□□□□□ -0.01
CCM2-212ENST00000480382 IL15P40933 162 aaPredicted RBP15□□□□□ -0.01
CCM2-212ENST00000480382 EPS15P42566 896 aa15□□□□□ -0.01
CCM2-212ENST00000480382 GYG1P46976 350 aa15□□□□□ -0.01
CCM2-212ENST00000480382 PUM3Q15397 648 aaKnown RBP15□□□□□ -0.01
CCM2-212ENST00000480382 CEP85Q6P2H3 762 aa15□□□□□ -0.01
CCM2-212ENST00000480382 ZNF804AQ7Z570 1209 aa15□□□□□ -0.01
CCM2-212ENST00000480382 FBXW7Q969H0 707 aa15□□□□□ -0.01
CCM2-212ENST00000480382 CD209Q9NNX6 404 aa15□□□□□ -0.01
CCM2-212ENST00000480382 GPRC5DQ9NZD1 345 aa15□□□□□ -0.01
CCM2-212ENST00000480382 ZNF609O15014 1411 aa15□□□□□ -0.01
CCM2-212ENST00000480382 SHTN1A0MZ66 631 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 VIL1P09327 827 aaKnown RBP14.99□□□□□ -0.01
CCM2-212ENST00000480382 FGFR2P21802 821 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 C1QTNF8P60827 252 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 ATP8B2P98198 1209 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 POLA2Q14181 598 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 RBM46Q8TBY0 533 aaKnown RBP14.99□□□□□ -0.01
CCM2-212ENST00000480382 SSH3Q8TE77 659 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 ZBTB40Q9NUA8 1239 aa14.99□□□□□ -0.01
CCM2-212ENST00000480382 EAPPQ56P03 285 aaPredicted RBP14.98□□□□□ -0.01
CCM2-212ENST00000480382 RSBN1LQ6PCB5 846 aaPredicted RBP14.98□□□□□ -0.01
CCM2-212ENST00000480382 MXD3Q9BW11 206 aa14.98□□□□□ -0.01
CCM2-212ENST00000480382 CEP126Q9P2H0 1117 aa14.98□□□□□ -0.01
CCM2-212ENST00000480382 SLC5A1P13866 664 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 IL1R1P14778 569 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 RPS12P25398 132 aaKnown RBP14.97□□□□□ -0.01
CCM2-212ENST00000480382 GTF2IP78347 998 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 ATP2B3Q16720 1220 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 DACT2Q5SW24 774 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 MICALL2Q8IY33 904 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 LPIN2Q92539 896 aa14.97□□□□□ -0.01
CCM2-212ENST00000480382 FAM84BQ96KN1 310 aaPredicted RBP14.97□□□□□ -0.01
CCM2-212ENST00000480382 CHMP4BQ9H444 224 aaKnown RBP14.97□□□□□ -0.01
CCM2-212ENST00000480382 IFIT1P09914 478 aaKnown RBP14.96□□□□□ -0.01
CCM2-212ENST00000480382 HIBADHP31937 336 aaKnown RBP14.96□□□□□ -0.01
CCM2-212ENST00000480382 TFCP2Q12800 502 aa14.96□□□□□ -0.01
CCM2-212ENST00000480382 CAVIN4Q5BKX8 364 aa14.96□□□□□ -0.01
CCM2-212ENST00000480382 STRIP1Q5VSL9 837 aa14.96□□□□□ -0.01
CCM2-212ENST00000480382 DPF2Q92785 391 aa14.96□□□□□ -0.01
CCM2-212ENST00000480382 ADARB2Q9NS39 739 aaKnown RBP14.96□□□□□ -0.01
CCM2-212ENST00000480382 CNOT7Q9UIV1 285 aaKnown RBP14.96□□□□□ -0.01
CCM2-212ENST00000480382 JAG2Q9Y219 1238 aa14.96□□□□□ -0.01
CCM2-212ENST00000480382 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.96□□□□□ -0.01
CCM2-212ENST00000480382 BCAMP50895 628 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 G3BP1Q13283 466 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCM2-212ENST00000480382 TTLL5Q6EMB2 1281 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 PNMA8AQ86V59 439 aaPredicted RBP14.95□□□□□ -0.02
CCM2-212ENST00000480382 LDHDQ86WU2 507 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 VPS37DQ86XT2 251 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 AGBL3Q8NEM8 1001 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 TRPM4Q8TD43 1214 aa14.95□□□□□ -0.02
CCM2-212ENST00000480382 IQSEC3Q9UPP2 1182 aaPredicted RBP14.95□□□□□ -0.02
CCM2-212ENST00000480382 H7C1D1 291 aa14.94□□□□□ -0.02
CCM2-212ENST00000480382 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
CCM2-212ENST00000480382 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
CCM2-212ENST00000480382 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
CCM2-212ENST00000480382 USP50Q70EL3 339 aaPredicted RBP14.94□□□□□ -0.02
CCM2-212ENST00000480382 FBXO33Q7Z6M2 555 aa14.94□□□□□ -0.02
CCM2-212ENST00000480382 TDRD7Q8NHU6 1098 aaKnown RBP14.94□□□□□ -0.02
CCM2-212ENST00000480382 GMLQ99445 158 aa14.94□□□□□ -0.02
CCM2-212ENST00000480382 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
CCM2-212ENST00000480382 COL1A1P02452 1464 aaPredicted RBP14.94□□□□□ -0.02
CCM2-212ENST00000480382 MYO3BQ8WXR4 1341 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 A0A1B0GUL7 405 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 SASH1O94885 1247 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 EGFRP00533 1210 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 ADORA1P30542 326 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 FSTL1Q12841 308 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 TBC1D10BQ4KMP7 808 aaPredicted RBP14.93□□□□□ -0.02
CCM2-212ENST00000480382 SAMD7Q7Z3H4 446 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 SIRT2Q8IXJ6 389 aa14.93□□□□□ -0.02
CCM2-212ENST00000480382 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms