RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 COA1Q9GZY4 146 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 DBNDD1Q9H9R9 158 aa24.44■■□□□ 1.5
LIME1-205ENST00000480139 ZNF541Q9H0D2 1346 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 G3V3G9 751 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 CENPBP07199 599 aaPredicted RBP24.43■■□□□ 1.5
LIME1-205ENST00000480139 DOK7Q18PE1 504 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 HSP90AB4PQ58FF6 505 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 DCAF8Q5TAQ9 597 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 SCN9AQ15858 1988 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 WDR90Q96KV7 1748 aa24.43■■□□□ 1.5
LIME1-205ENST00000480139 KDM2BQ8NHM5 1336 aa24.42■■□□□ 1.5
LIME1-205ENST00000480139 YDJCA8MPS7 323 aa24.42■■□□□ 1.5
LIME1-205ENST00000480139 ZNF804AQ7Z570 1209 aa24.42■■□□□ 1.5
LIME1-205ENST00000480139 GPC2Q8N158 579 aa24.42■■□□□ 1.5
LIME1-205ENST00000480139 AKAP2Q9Y2D5 859 aa24.42■■□□□ 1.5
LIME1-205ENST00000480139 ZNF646O15015 1829 aaPredicted RBP24.41■■□□□ 1.5
LIME1-205ENST00000480139 SASH1O94885 1247 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 IFIT1P09914 478 aaKnown RBP24.41■■□□□ 1.5
LIME1-205ENST00000480139 SLC5A1P13866 664 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 TFCP2Q12800 502 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 ATP2B3Q16720 1220 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 ERC1Q8IUD2 1116 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 EXOC6Q8TAG9 804 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 PCDHB15Q9Y5E8 787 aa24.41■■□□□ 1.5
LIME1-205ENST00000480139 CXCL9Q07325 125 aa24.4■■□□□ 1.5
LIME1-205ENST00000480139 OS9Q13438 667 aaPredicted RBP24.4■■□□□ 1.5
LIME1-205ENST00000480139 GPR108Q9NPR9 543 aa24.4■■□□□ 1.5
LIME1-205ENST00000480139 ZNF609O15014 1411 aa24.39■■□□□ 1.5
LIME1-205ENST00000480139 TNIP1Q15025 636 aa24.39■■□□□ 1.49
LIME1-205ENST00000480139 CIAPIN1Q6FI81 312 aa24.39■■□□□ 1.49
LIME1-205ENST00000480139 FAM84BQ96KN1 310 aaPredicted RBP24.39■■□□□ 1.49
LIME1-205ENST00000480139 IL1R1P14778 569 aa24.38■■□□□ 1.49
LIME1-205ENST00000480139 CAVIN4Q5BKX8 364 aa24.38■■□□□ 1.49
LIME1-205ENST00000480139 L3MBTL3Q96JM7 780 aaPredicted RBP24.38■■□□□ 1.49
LIME1-205ENST00000480139 CD209Q9NNX6 404 aa24.38■■□□□ 1.49
LIME1-205ENST00000480139 EXOC6BQ9Y2D4 811 aa24.38■■□□□ 1.49
LIME1-205ENST00000480139 SCN4AP35499 1836 aa24.38■■□□□ 1.49
LIME1-205ENST00000480139 RAB11FIP3O75154 756 aa24.37■■□□□ 1.49
LIME1-205ENST00000480139 DDNO94850 711 aaPredicted RBP24.37■■□□□ 1.49
LIME1-205ENST00000480139 HIBADHP31937 336 aaKnown RBP24.37■■□□□ 1.49
LIME1-205ENST00000480139 FBXO33Q7Z6M2 555 aa24.37■■□□□ 1.49
LIME1-205ENST00000480139 ZNF784Q8NCA9 323 aaPredicted RBP24.37■■□□□ 1.49
LIME1-205ENST00000480139 A0A1B0GUL7 405 aa24.36■■□□□ 1.49
LIME1-205ENST00000480139 ZBTB22O15209 634 aa24.36■■□□□ 1.49
LIME1-205ENST00000480139 RAD17O75943 681 aa24.36■■□□□ 1.49
LIME1-205ENST00000480139 GYG1P46976 350 aa24.36■■□□□ 1.49
LIME1-205ENST00000480139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.36■■□□□ 1.49
LIME1-205ENST00000480139 TDRD7Q8NHU6 1098 aaKnown RBP24.35■■□□□ 1.49
LIME1-205ENST00000480139 KCNQ5Q9NR82 932 aa24.35■■□□□ 1.49
LIME1-205ENST00000480139 MYH13Q9UKX3 1938 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 USP17L3A6NCW0 530 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 USP17L4A6NCW7 530 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 PSMD14O00487 310 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 VIL1P09327 827 aaKnown RBP24.34■■□□□ 1.49
LIME1-205ENST00000480139 HDAC1Q13547 482 aaPredicted RBP24.34■■□□□ 1.49
LIME1-205ENST00000480139 USP17L1Q7RTZ2 530 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 VPS37DQ86XT2 251 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 KIF1BPQ96EK5 621 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 DCTPP1Q9H773 170 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 GPBP1L1Q9HC44 474 aaPredicted RBP24.34■■□□□ 1.49
LIME1-205ENST00000480139 GJA3Q9Y6H8 435 aa24.34■■□□□ 1.49
LIME1-205ENST00000480139 TIMM10P62072 90 aa24.33■■□□□ 1.49
LIME1-205ENST00000480139 IRX6P78412 446 aaPredicted RBP24.33■■□□□ 1.49
LIME1-205ENST00000480139 TNNI3KQ59H18 835 aa24.33■■□□□ 1.49
LIME1-205ENST00000480139 STRIP1Q5VSL9 837 aa24.33■■□□□ 1.49
LIME1-205ENST00000480139 RHPN1Q8TCX5 695 aa24.33■■□□□ 1.49
LIME1-205ENST00000480139 FPGT-TNNI3KV9GXZ4 949 aa24.33■■□□□ 1.49
LIME1-205ENST00000480139 RPS12P25398 132 aaKnown RBP24.32■■□□□ 1.48
LIME1-205ENST00000480139 BCAMP50895 628 aa24.32■■□□□ 1.48
LIME1-205ENST00000480139 ZNF526Q8TF50 670 aaPredicted RBP24.32■■□□□ 1.48
LIME1-205ENST00000480139 DACT2Q5SW24 774 aa24.31■■□□□ 1.48
LIME1-205ENST00000480139 XAGE2Q96GT9 111 aa24.31■■□□□ 1.48
LIME1-205ENST00000480139 FAM205AQ6ZU69 1335 aa24.31■■□□□ 1.48
LIME1-205ENST00000480139 MYO3BQ8WXR4 1341 aa24.31■■□□□ 1.48
LIME1-205ENST00000480139 IQCA1LA6NCM1 817 aa24.3■■□□□ 1.48
LIME1-205ENST00000480139 ADORA1P30542 326 aa24.3■■□□□ 1.48
LIME1-205ENST00000480139 FKBP1AP62942 108 aaKnown RBP24.3■■□□□ 1.48
LIME1-205ENST00000480139 TTLL5Q6EMB2 1281 aa24.3■■□□□ 1.48
LIME1-205ENST00000480139 RSBN1LQ6PCB5 846 aaPredicted RBP24.3■■□□□ 1.48
LIME1-205ENST00000480139 DPF2Q92785 391 aa24.3■■□□□ 1.48
LIME1-205ENST00000480139 NEUROD6Q96NK8 337 aa24.3■■□□□ 1.48
LIME1-205ENST00000480139 POTECB2RU33 542 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 SEMA3EO15041 775 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 VEGFAP15692 232 aaPredicted RBP24.29■■□□□ 1.48
LIME1-205ENST00000480139 GMPSP49915 693 aaPredicted RBP24.29■■□□□ 1.48
LIME1-205ENST00000480139 SCNN1DP51172 638 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 GTF2IP78347 998 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 CCDC102BQ68D86 513 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 AGBL3Q8NEM8 1001 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 NMRK2Q9NPI5 230 aa24.29■■□□□ 1.48
LIME1-205ENST00000480139 GNL3LQ9NVN8 582 aaKnown RBP24.29■■□□□ 1.48
LIME1-205ENST00000480139 EAF2Q96CJ1 260 aaPredicted RBP24.28■■□□□ 1.48
LIME1-205ENST00000480139 LRRCC1Q9C099 1032 aa24.28■■□□□ 1.48
LIME1-205ENST00000480139 LMOD1P29536 600 aaPredicted RBP24.27■■□□□ 1.48
LIME1-205ENST00000480139 PHKA1P46020 1223 aa24.27■■□□□ 1.48
LIME1-205ENST00000480139 CLASRPQ8N2M8 674 aaKnown RBP24.27■■□□□ 1.48
LIME1-205ENST00000480139 GMLQ99445 158 aa24.27■■□□□ 1.48
LIME1-205ENST00000480139 RRAGCQ9HB90 399 aa24.27■■□□□ 1.48
LIME1-205ENST00000480139 GPRC5DQ9NZD1 345 aa24.27■■□□□ 1.48
LIME1-205ENST00000480139 HACL1Q9UJ83 578 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms