RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 TBC1D10BQ4KMP7 808 aaPredicted RBP13.47□□□□□ -0.25
SMURF1-204ENST00000480055 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
SMURF1-204ENST00000480055 ZNF609O15014 1411 aa13.47□□□□□ -0.25
SMURF1-204ENST00000480055 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 SLC10A3P09131 477 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
SMURF1-204ENST00000480055 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
SMURF1-204ENST00000480055 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
SMURF1-204ENST00000480055 DBNDD1Q9H9R9 158 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 RNF186Q9NXI6 227 aa13.46□□□□□ -0.25
SMURF1-204ENST00000480055 NSFL1CQ9UNZ2 370 aaKnown RBP13.46□□□□□ -0.25
SMURF1-204ENST00000480055 TRPA1O75762 1119 aa13.45□□□□□ -0.26
SMURF1-204ENST00000480055 ZNF157P51786 506 aaPredicted RBP13.45□□□□□ -0.26
SMURF1-204ENST00000480055 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
SMURF1-204ENST00000480055 PDCD7Q8N8D1 485 aaKnown RBP13.45□□□□□ -0.26
SMURF1-204ENST00000480055 MS4A4AQ96JQ5 239 aa13.45□□□□□ -0.26
SMURF1-204ENST00000480055 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
SMURF1-204ENST00000480055 C6orf229H3BNL8 230 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 ECE2O60344 883 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 RALBP1Q15311 655 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
SMURF1-204ENST00000480055 CTU1Q7Z7A3 348 aaKnown RBP13.44□□□□□ -0.26
SMURF1-204ENST00000480055 CELF1Q92879 486 aaKnown RBP13.44□□□□□ -0.26
SMURF1-204ENST00000480055 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 POLLQ9UGP5 575 aa13.44□□□□□ -0.26
SMURF1-204ENST00000480055 ECM29Q5VYK3 1845 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 SF3B3Q15393 1217 aaKnown RBP13.43□□□□□ -0.26
SMURF1-204ENST00000480055 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
SMURF1-204ENST00000480055 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 PRPF38BQ5VTL8 546 aaKnown RBP13.43□□□□□ -0.26
SMURF1-204ENST00000480055 ANKRD13DQ6ZTN6 518 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 GGA3Q9NZ52 723 aa13.43□□□□□ -0.26
SMURF1-204ENST00000480055 GPSM2P81274 684 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 SULF1Q8IWU6 871 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 CDCA5Q96FF9 252 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 EYA3Q99504 573 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
SMURF1-204ENST00000480055 CHL1O00533 1208 aa13.41□□□□□ -0.26
SMURF1-204ENST00000480055 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMURF1-204ENST00000480055 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
SMURF1-204ENST00000480055 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.26
SMURF1-204ENST00000480055 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
SMURF1-204ENST00000480055 TBC1D16Q8TBP0 767 aa13.4□□□□□ -0.26
SMURF1-204ENST00000480055 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
SMURF1-204ENST00000480055 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
SMURF1-204ENST00000480055 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
SMURF1-204ENST00000480055 PPP1R37O75864 691 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 ZNF280AP59817 542 aaPredicted RBP13.39□□□□□ -0.27
SMURF1-204ENST00000480055 FKBP1BP68106 108 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
SMURF1-204ENST00000480055 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
SMURF1-204ENST00000480055 HOXB7P09629 217 aa13.38□□□□□ -0.27
SMURF1-204ENST00000480055 RPS8P62241 208 aaKnown RBP13.38□□□□□ -0.27
SMURF1-204ENST00000480055 ANGEL2Q5VTE6 544 aaKnown RBP13.38□□□□□ -0.27
SMURF1-204ENST00000480055 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
SMURF1-204ENST00000480055 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
SMURF1-204ENST00000480055 MYBBP1AQ9BQG0 1328 aaKnown RBP13.38□□□□□ -0.27
SMURF1-204ENST00000480055 PITPNM2Q9BZ72 1349 aa13.38□□□□□ -0.27
SMURF1-204ENST00000480055 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
SMURF1-204ENST00000480055 PKN2Q16513 984 aaKnown RBP13.37□□□□□ -0.27
SMURF1-204ENST00000480055 DUSP27Q5VZP5 1158 aa13.37□□□□□ -0.27
SMURF1-204ENST00000480055 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
SMURF1-204ENST00000480055 UFL1O94874 794 aa13.36□□□□□ -0.27
SMURF1-204ENST00000480055 SCARF1Q14162 830 aa13.36□□□□□ -0.27
SMURF1-204ENST00000480055 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
SMURF1-204ENST00000480055 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
SMURF1-204ENST00000480055 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
SMURF1-204ENST00000480055 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
SMURF1-204ENST00000480055 ZBTB38Q8NAP3 1195 aaPredicted RBP13.35□□□□□ -0.27
SMURF1-204ENST00000480055 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
SMURF1-204ENST00000480055 CCDC85AQ96PX6 553 aaPredicted RBP13.35□□□□□ -0.27
SMURF1-204ENST00000480055 GMLQ99445 158 aa13.35□□□□□ -0.27
SMURF1-204ENST00000480055 MYD88Q99836 296 aa13.35□□□□□ -0.27
SMURF1-204ENST00000480055 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
SMURF1-204ENST00000480055 GGA1Q9UJY5 639 aa13.35□□□□□ -0.27
SMURF1-204ENST00000480055 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
SMURF1-204ENST00000480055 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
SMURF1-204ENST00000480055 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
SMURF1-204ENST00000480055 MYOZ2Q9NPC6 264 aa13.34□□□□□ -0.27
SMURF1-204ENST00000480055 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
SMURF1-204ENST00000480055 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
SMURF1-204ENST00000480055 OTOFQ9HC10 1997 aa13.33□□□□□ -0.28
SMURF1-204ENST00000480055 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
SMURF1-204ENST00000480055 MOB2Q70IA6 237 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms