RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.13■■□□□ 1.45
COL13A1-208ENST00000479733 FAM177A1Q8N128 213 aaPredicted RBP24.12■■□□□ 1.45
COL13A1-208ENST00000479733 L2HGDHQ9H9P8 463 aa24.12■■□□□ 1.45
COL13A1-208ENST00000479733 AGLP35573 1532 aa24.12■■□□□ 1.45
COL13A1-208ENST00000479733 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
COL13A1-208ENST00000479733 TOPAZ1Q8N9V7 1692 aa24.12■■□□□ 1.45
COL13A1-208ENST00000479733 IGKV5-2P06315 115 aa24.12■■□□□ 1.45
COL13A1-208ENST00000479733 FMR1NBQ8N0W7 255 aaPredicted RBP24.12■■□□□ 1.45
COL13A1-208ENST00000479733 MCMDC2Q4G0Z9 681 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 DBNDD2Q9BQY9 259 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 ZNF609O15014 1411 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 TNRQ92752 1358 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 PNMA6AP0CW24 399 aaPredicted RBP24.11■■□□□ 1.45
COL13A1-208ENST00000479733 DHX32Q7L7V1 743 aaKnown RBP24.11■■□□□ 1.45
COL13A1-208ENST00000479733 GOLGA8FQ08AF8 430 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 GOLGA8DPQ0D2H9 430 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 EPC1Q9H2F5 836 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 KIAA1468Q9P260 1216 aa24.11■■□□□ 1.45
COL13A1-208ENST00000479733 UBXN4Q92575 508 aa24.1■■□□□ 1.45
COL13A1-208ENST00000479733 IMPACTQ9P2X3 320 aa24.1■■□□□ 1.45
COL13A1-208ENST00000479733 CLIC4Q9Y696 253 aa24.1■■□□□ 1.45
COL13A1-208ENST00000479733 URI1O94763 535 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-208ENST00000479733 SEC31AO94979 1220 aaKnown RBP24.09■■□□□ 1.45
COL13A1-208ENST00000479733 STK38Q15208 465 aa24.09■■□□□ 1.45
COL13A1-208ENST00000479733 LLPHQ9BRT6 129 aaKnown RBP24.09■■□□□ 1.45
COL13A1-208ENST00000479733 DDX58O95786 925 aaKnown RBP24.09■■□□□ 1.45
COL13A1-208ENST00000479733 PLA2G4AP47712 749 aa24.09■■□□□ 1.45
COL13A1-208ENST00000479733 PIP4K2AP48426 406 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-208ENST00000479733 CCDC93Q567U6 631 aa24.09■■□□□ 1.45
COL13A1-208ENST00000479733 RAB11FIP4Q86YS3 637 aa24.09■■□□□ 1.45
COL13A1-208ENST00000479733 TMX1Q9H3N1 280 aa24.09■■□□□ 1.45
COL13A1-208ENST00000479733 ATP1A3P13637 1013 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 ATP5JP18859 108 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 TNNI3KQ59H18 835 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 AKAP4Q5JQC9 854 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 CCDC150Q8NCX0 1101 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 GJB4Q9NTQ9 266 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 CALCOCO1Q9P1Z2 691 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 FPGT-TNNI3KV9GXZ4 949 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 MYD88Q99836 296 aa24.08■■□□□ 1.45
COL13A1-208ENST00000479733 GPHNQ9NQX3 736 aaPredicted RBP24.08■■□□□ 1.45
COL13A1-208ENST00000479733 RNMTO43148 476 aaKnown RBP24.07■■□□□ 1.44
COL13A1-208ENST00000479733 HNRNPH2P55795 449 aaKnown RBP24.07■■□□□ 1.44
COL13A1-208ENST00000479733 MNS1Q8NEH6 495 aa24.07■■□□□ 1.44
COL13A1-208ENST00000479733 JCADQ9P266 1359 aa24.07■■□□□ 1.44
COL13A1-208ENST00000479733 PIK3C2AO00443 1686 aa24.07■■□□□ 1.44
COL13A1-208ENST00000479733 NRDCO43847 1150 aa24.07■■□□□ 1.44
COL13A1-208ENST00000479733 SLC3A2P08195 630 aaKnown RBP24.07■■□□□ 1.44
COL13A1-208ENST00000479733 TMCO3Q6UWJ1 677 aa24.07■■□□□ 1.44
COL13A1-208ENST00000479733 KCND1Q9NSA2 647 aa24.06■■□□□ 1.44
COL13A1-208ENST00000479733 PSDA5PKW4 1024 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-208ENST00000479733 CYP2C19P33261 490 aa24.06■■□□□ 1.44
COL13A1-208ENST00000479733 PLEKHO1Q53GL0 409 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-208ENST00000479733 ADALQ6DHV7 355 aa24.06■■□□□ 1.44
COL13A1-208ENST00000479733 NEK11Q8NG66 645 aa24.06■■□□□ 1.44
COL13A1-208ENST00000479733 ZBTB9Q96C00 473 aa24.06■■□□□ 1.44
COL13A1-208ENST00000479733 ETF1P62495 437 aaKnown RBP24.05■■□□□ 1.44
COL13A1-208ENST00000479733 NEXNQ0ZGT2 675 aa24.05■■□□□ 1.44
COL13A1-208ENST00000479733 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
COL13A1-208ENST00000479733 CARD6Q9BX69 1037 aa24.05■■□□□ 1.44
COL13A1-208ENST00000479733 ZCCHC17Q9NP64 241 aaKnown RBP24.05■■□□□ 1.44
COL13A1-208ENST00000479733 PDIA3P30101 505 aaKnown RBP24.05■■□□□ 1.44
COL13A1-208ENST00000479733 IP6K1Q92551 441 aa24.05■■□□□ 1.44
COL13A1-208ENST00000479733 UTP14AQ9BVJ6 771 aaKnown RBP24.05■■□□□ 1.44
COL13A1-208ENST00000479733 GOLIM4O00461 696 aa24.04■■□□□ 1.44
COL13A1-208ENST00000479733 CEBPAP49715 358 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-208ENST00000479733 NEUROD6Q96NK8 337 aa24.04■■□□□ 1.44
COL13A1-208ENST00000479733 RGPD8O14715 1765 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-208ENST00000479733 FANCCQ00597 558 aa24.04■■□□□ 1.44
COL13A1-208ENST00000479733 NEURL1BA8MQ27 555 aa24.04■■□□□ 1.44
COL13A1-208ENST00000479733 TPM4P67936 248 aa24.04■■□□□ 1.44
COL13A1-208ENST00000479733 LINC00301Q8NCQ3 95 aa24.04■■□□□ 1.44
COL13A1-208ENST00000479733 ORC3Q9UBD5 711 aaPredicted RBP24.04■■□□□ 1.44
COL13A1-208ENST00000479733 FDPSP14324 419 aaKnown RBP24.03■■□□□ 1.44
COL13A1-208ENST00000479733 GCKRQ14397 625 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 RBM33Q96EV2 1170 aaKnown RBP24.03■■□□□ 1.44
COL13A1-208ENST00000479733 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
COL13A1-208ENST00000479733 FANCGO15287 622 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 ZNF202O95125 648 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 HSP90AA4PQ58FG1 418 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 TTLL5Q6EMB2 1281 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 DPF2Q92785 391 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 ARGLU1Q9NWB6 273 aaPredicted RBP24.03■■□□□ 1.44
COL13A1-208ENST00000479733 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
COL13A1-208ENST00000479733 E7EWF7 191 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 HMGB1P09429 215 aaKnown RBP24.02■■□□□ 1.44
COL13A1-208ENST00000479733 XAGE3Q8WTP9 111 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 UTYO14607 1347 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 CARMIL3Q8ND23 1372 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 SERPINC1P01008 464 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 CAPN2P17655 700 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 PTPN12Q05209 780 aaKnown RBP24.02■■□□□ 1.44
COL13A1-208ENST00000479733 NCAPHQ15003 741 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 COPS6Q7L5N1 327 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 RTEL1Q9NZ71 1219 aa24.02■■□□□ 1.44
COL13A1-208ENST00000479733 MARCKSP29966 332 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-208ENST00000479733 GNL2Q13823 731 aaKnown RBP24.01■■□□□ 1.43
COL13A1-208ENST00000479733 UBE3BQ7Z3V4 1068 aa24.01■■□□□ 1.43
COL13A1-208ENST00000479733 SPTLC2O15270 562 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms