RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ARMC9Q7Z3E5 817 aa22.55■■□□□ 1.2
HMGN1-212ENST00000479586 ANKRD18AQ8IVF6 992 aa22.55■■□□□ 1.2
HMGN1-212ENST00000479586 RIC3Q7Z5B4 369 aa22.54■■□□□ 1.2
HMGN1-212ENST00000479586 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
HMGN1-212ENST00000479586 FBXW7Q969H0 707 aa22.54■■□□□ 1.2
HMGN1-212ENST00000479586 FZD1Q9UP38 647 aa22.54■■□□□ 1.2
HMGN1-212ENST00000479586 RBBP6Q7Z6E9 1792 aaKnown RBP22.53■■□□□ 1.2
HMGN1-212ENST00000479586 MED23Q9ULK4 1368 aa22.53■■□□□ 1.2
HMGN1-212ENST00000479586 PDE8AO60658 829 aa22.53■■□□□ 1.2
HMGN1-212ENST00000479586 ALDH1A1P00352 501 aa22.53■■□□□ 1.2
HMGN1-212ENST00000479586 HSP90B1P14625 803 aaKnown RBP22.53■■□□□ 1.2
HMGN1-212ENST00000479586 FXR1P51114 621 aaKnown RBP eCLIP22.53■■□□□ 1.2
HMGN1-212ENST00000479586 LDLRAD1Q5T700 205 aa22.53■■□□□ 1.2
HMGN1-212ENST00000479586 MYD88Q99836 296 aa22.53■■□□□ 1.2
HMGN1-212ENST00000479586 ANGEL1Q9UNK9 670 aaKnown RBP22.53■■□□□ 1.2
HMGN1-212ENST00000479586 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
HMGN1-212ENST00000479586 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
HMGN1-212ENST00000479586 DUSP27Q5VZP5 1158 aa22.52■■□□□ 1.2
HMGN1-212ENST00000479586 INTS3Q68E01 1043 aaKnown RBP22.52■■□□□ 1.2
HMGN1-212ENST00000479586 CCDC146Q8IYE0 955 aa22.52■■□□□ 1.2
HMGN1-212ENST00000479586 TRIM35Q9UPQ4 493 aa22.52■■□□□ 1.2
HMGN1-212ENST00000479586 IFNL1Q8IU54 200 aa22.51■■□□□ 1.19
HMGN1-212ENST00000479586 PHAXQ9H814 394 aaKnown RBP22.51■■□□□ 1.19
HMGN1-212ENST00000479586 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.51■■□□□ 1.19
HMGN1-212ENST00000479586 SPEF2Q9C093 1822 aa22.51■■□□□ 1.19
HMGN1-212ENST00000479586 CCDC191Q8NCU4 936 aa22.5■■□□□ 1.19
HMGN1-212ENST00000479586 MYO3BQ8WXR4 1341 aa22.5■■□□□ 1.19
HMGN1-212ENST00000479586 MANSC4A6NHS7 340 aaPredicted RBP22.49■■□□□ 1.19
HMGN1-212ENST00000479586 IGF2BP3O00425 579 aaKnown RBP eCLIP22.49■■□□□ 1.19
HMGN1-212ENST00000479586 EN2P19622 333 aaPredicted RBP22.49■■□□□ 1.19
HMGN1-212ENST00000479586 STRIP1Q5VSL9 837 aa22.49■■□□□ 1.19
HMGN1-212ENST00000479586 APOBEC3FQ8IUX4 373 aaKnown RBP22.49■■□□□ 1.19
HMGN1-212ENST00000479586 CWC25Q9NXE8 425 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-212ENST00000479586 MINPP1Q9UNW1 487 aa22.48■■□□□ 1.19
HMGN1-212ENST00000479586 PTPN22Q9Y2R2 807 aa22.48■■□□□ 1.19
HMGN1-212ENST00000479586 TXNRD3Q86VQ6 643 aa22.47■■□□□ 1.19
HMGN1-212ENST00000479586 KIAA0825Q8IV33 1275 aa22.47■■□□□ 1.19
HMGN1-212ENST00000479586 CD99L2Q8TCZ2 262 aa22.47■■□□□ 1.19
HMGN1-212ENST00000479586 SLC10A4Q96EP9 437 aa22.47■■□□□ 1.19
HMGN1-212ENST00000479586 CLMNQ96JQ2 1002 aa22.47■■□□□ 1.19
HMGN1-212ENST00000479586 CDC5LQ99459 802 aaKnown RBP22.47■■□□□ 1.19
HMGN1-212ENST00000479586 COA1Q9GZY4 146 aa22.47■■□□□ 1.19
HMGN1-212ENST00000479586 SSC5DA1L4H1 1573 aa22.46■■□□□ 1.19
HMGN1-212ENST00000479586 LAMB1P07942 1786 aa22.46■■□□□ 1.19
HMGN1-212ENST00000479586 CCT4P50991 539 aaKnown RBP22.46■■□□□ 1.19
HMGN1-212ENST00000479586 CTSWP56202 376 aa22.46■■□□□ 1.19
HMGN1-212ENST00000479586 INHBEP58166 350 aa22.46■■□□□ 1.19
HMGN1-212ENST00000479586 ZBED3Q96IU2 234 aaPredicted RBP22.46■■□□□ 1.19
HMGN1-212ENST00000479586 WNK4Q96J92 1243 aa22.46■■□□□ 1.19
HMGN1-212ENST00000479586 CEP290O15078 2479 aa22.45■■□□□ 1.18
HMGN1-212ENST00000479586 ARMC5Q96C12 935 aa22.45■■□□□ 1.18
HMGN1-212ENST00000479586 ERO1AQ96HE7 468 aa22.45■■□□□ 1.18
HMGN1-212ENST00000479586 BSDC1Q9NW68 430 aaPredicted RBP22.45■■□□□ 1.18
HMGN1-212ENST00000479586 COL1A1P02452 1464 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-212ENST00000479586 ZBTB48P10074 688 aaPredicted RBP22.44■■□□□ 1.18
HMGN1-212ENST00000479586 KLRK1P26718 216 aa22.44■■□□□ 1.18
HMGN1-212ENST00000479586 CAP1Q01518 475 aa22.44■■□□□ 1.18
HMGN1-212ENST00000479586 DEFB129Q9H1M3 183 aa22.44■■□□□ 1.18
HMGN1-212ENST00000479586 MBIPQ9NS73 344 aa22.44■■□□□ 1.18
HMGN1-212ENST00000479586 SZT2Q5T011 3432 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 MMP14P50281 582 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 CRHR2Q13324 411 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 MAP3K11Q16584 847 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 TTLL5Q6EMB2 1281 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 TTLL11Q8NHH1 800 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 GREM2Q9H772 168 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 COLQQ9Y215 455 aaPredicted RBP22.43■■□□□ 1.18
HMGN1-212ENST00000479586 TRIOBPQ9H2D6 2365 aa22.43■■□□□ 1.18
HMGN1-212ENST00000479586 METTL22Q9BUU2 404 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-212ENST00000479586 EFCC1Q9HA90 598 aa22.42■■□□□ 1.18
HMGN1-212ENST00000479586 MYH3P11055 1940 aa22.41■■□□□ 1.18
HMGN1-212ENST00000479586 GJA5P36382 358 aa22.41■■□□□ 1.18
HMGN1-212ENST00000479586 GTF2IP78347 998 aa22.41■■□□□ 1.18
HMGN1-212ENST00000479586 ELL2O00472 640 aaPredicted RBP22.4■■□□□ 1.18
HMGN1-212ENST00000479586 RUNDC1Q96C34 613 aa22.4■■□□□ 1.18
HMGN1-212ENST00000479586 PCDHAC2Q9Y5I4 1007 aa22.4■■□□□ 1.18
HMGN1-212ENST00000479586 PPP1R12BO60237 982 aaPredicted RBP22.39■■□□□ 1.17
HMGN1-212ENST00000479586 DLGAP5Q15398 846 aa22.39■■□□□ 1.17
HMGN1-212ENST00000479586 PTPN18Q99952 460 aa22.39■■□□□ 1.17
HMGN1-212ENST00000479586 LEMD3Q9Y2U8 911 aa22.39■■□□□ 1.17
HMGN1-212ENST00000479586 ZNF804BA4D1E1 1349 aa22.38■■□□□ 1.17
HMGN1-212ENST00000479586 SP3Q02447 781 aa22.38■■□□□ 1.17
HMGN1-212ENST00000479586 ZNF333Q96JL9 665 aa22.38■■□□□ 1.17
HMGN1-212ENST00000479586 ECM29Q5VYK3 1845 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 OTUD7BQ6GQQ9 843 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 CERS5Q8N5B7 392 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 TMEM106CQ9BVX2 250 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 MAP3K2Q9Y2U5 619 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 PPP2R3BQ9Y5P8 575 aa22.37■■□□□ 1.17
HMGN1-212ENST00000479586 CLRN2A0PK11 232 aa22.36■■□□□ 1.17
HMGN1-212ENST00000479586 DDX58O95786 925 aaKnown RBP22.36■■□□□ 1.17
HMGN1-212ENST00000479586 ZNF853P0CG23 659 aa22.36■■□□□ 1.17
HMGN1-212ENST00000479586 IGHMBP2P38935 993 aaKnown RBP22.35■■□□□ 1.17
HMGN1-212ENST00000479586 NBPF12Q5TAG4 269 aaPredicted RBP22.35■■□□□ 1.17
HMGN1-212ENST00000479586 MTMR14Q8NCE2 650 aa22.35■■□□□ 1.17
HMGN1-212ENST00000479586 AOX1Q06278 1338 aa22.34■■□□□ 1.17
HMGN1-212ENST00000479586 OTOFQ9HC10 1997 aa22.34■■□□□ 1.17
HMGN1-212ENST00000479586 TESPA1A2RU30 521 aaPredicted RBP22.34■■□□□ 1.17
HMGN1-212ENST00000479586 UNCXA6NJT0 531 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms