RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
CDK11A-216ENST00000479362 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
CDK11A-216ENST00000479362 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
CDK11A-216ENST00000479362 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.33
CDK11A-216ENST00000479362 DDX60Q8IY21 1712 aaKnown RBP13.02□□□□□ -0.33
CDK11A-216ENST00000479362 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.33
CDK11A-216ENST00000479362 GRM8O00222 908 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 ZBTB7BO15156 539 aaPredicted RBP13.01□□□□□ -0.33
CDK11A-216ENST00000479362 UBTFL1P0CB47 393 aaPredicted RBP13.01□□□□□ -0.33
CDK11A-216ENST00000479362 ALDH1B1P30837 517 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 GMPSP49915 693 aaPredicted RBP13.01□□□□□ -0.33
CDK11A-216ENST00000479362 AAMPQ13685 434 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
CDK11A-216ENST00000479362 UTYO14607 1347 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 SLC10A3P09131 477 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 USP48Q86UV5 1035 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 NIM1KQ8IY84 436 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
CDK11A-216ENST00000479362 KIAA0100Q14667 2235 aaKnown RBP13□□□□□ -0.33
CDK11A-216ENST00000479362 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
CDK11A-216ENST00000479362 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 ZNF157P51786 506 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 CXCL9Q07325 125 aa12.99□□□□□ -0.33
CDK11A-216ENST00000479362 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
CDK11A-216ENST00000479362 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
CDK11A-216ENST00000479362 ERICH6BQ5W0A0 696 aa12.99□□□□□ -0.33
CDK11A-216ENST00000479362 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
CDK11A-216ENST00000479362 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-216ENST00000479362 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 H7C1W4 665 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 NTSR2O95665 410 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 GNAI2P04899 355 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 RTL5Q5HYW3 569 aaPredicted RBP12.98□□□□□ -0.33
CDK11A-216ENST00000479362 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
CDK11A-216ENST00000479362 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
CDK11A-216ENST00000479362 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
CDK11A-216ENST00000479362 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
CDK11A-216ENST00000479362 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 CASP7P55210 303 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 AOC3Q16853 763 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
CDK11A-216ENST00000479362 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
CDK11A-216ENST00000479362 LRRFIP2Q9Y608 721 aaKnown RBP12.97□□□□□ -0.33
CDK11A-216ENST00000479362 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
CDK11A-216ENST00000479362 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
CDK11A-216ENST00000479362 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
CDK11A-216ENST00000479362 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
CDK11A-216ENST00000479362 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
CDK11A-216ENST00000479362 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
CDK11A-216ENST00000479362 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
CDK11A-216ENST00000479362 C2orf69Q8N8R5 385 aa12.95□□□□□ -0.34
CDK11A-216ENST00000479362 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
CDK11A-216ENST00000479362 IRS4O14654 1257 aaPredicted RBP12.94□□□□□ -0.34
CDK11A-216ENST00000479362 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
CDK11A-216ENST00000479362 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
CDK11A-216ENST00000479362 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
CDK11A-216ENST00000479362 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
CDK11A-216ENST00000479362 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
CDK11A-216ENST00000479362 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
CDK11A-216ENST00000479362 SPEF2Q9C093 1822 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
CDK11A-216ENST00000479362 EPHA10Q5JZY3 1008 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 CEP85Q6P2H3 762 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 ANKRD44Q8N8A2 993 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 PPP4R2Q9NY27 417 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
CDK11A-216ENST00000479362 PDE8AO60658 829 aa12.92□□□□□ -0.34
CDK11A-216ENST00000479362 EGFRP00533 1210 aa12.92□□□□□ -0.34
CDK11A-216ENST00000479362 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
CDK11A-216ENST00000479362 CTSWP56202 376 aa12.92□□□□□ -0.34
CDK11A-216ENST00000479362 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
CDK11A-216ENST00000479362 RPAP2Q8IXW5 612 aaPredicted RBP12.92□□□□□ -0.34
CDK11A-216ENST00000479362 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
CDK11A-216ENST00000479362 GPR25O00155 361 aa12.91□□□□□ -0.34
CDK11A-216ENST00000479362 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
CDK11A-216ENST00000479362 HMMRO75330 724 aa12.91□□□□□ -0.34
CDK11A-216ENST00000479362 RAD17O75943 681 aa12.91□□□□□ -0.34
CDK11A-216ENST00000479362 FOXO4P98177 505 aa12.91□□□□□ -0.34
CDK11A-216ENST00000479362 MTX1Q13505 466 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms