RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
CHD3-210ENST00000479080 ATP2B4P23634 1241 aa16.09■□□□□ 0.17
CHD3-210ENST00000479080 PHKA1P46020 1223 aa16.09■□□□□ 0.17
CHD3-210ENST00000479080 SCARF1Q14162 830 aa16.09■□□□□ 0.17
CHD3-210ENST00000479080 NEUROD6Q96NK8 337 aa16.09■□□□□ 0.17
CHD3-210ENST00000479080 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
CHD3-210ENST00000479080 SLC5A1P13866 664 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 GYG1P46976 350 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 BCAMP50895 628 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
CHD3-210ENST00000479080 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.16
CHD3-210ENST00000479080 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
CHD3-210ENST00000479080 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.16
CHD3-210ENST00000479080 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 GGA1Q9UJY5 639 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 LEMD3Q9Y2U8 911 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 AOX1Q06278 1338 aa16.08■□□□□ 0.16
CHD3-210ENST00000479080 TTC22Q5TAA0 569 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 FBXO33Q7Z6M2 555 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 MPNDQ8N594 471 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 NDUFB9Q9Y6M9 179 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 TTC41PQ6P2S7 1318 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
CHD3-210ENST00000479080 GOLGB1Q14789 3259 aaKnown RBP16.06■□□□□ 0.16
CHD3-210ENST00000479080 NFKBIEO00221 500 aa16.06■□□□□ 0.16
CHD3-210ENST00000479080 IFIT1P09914 478 aaKnown RBP16.06■□□□□ 0.16
CHD3-210ENST00000479080 ATP5JP18859 108 aa16.06■□□□□ 0.16
CHD3-210ENST00000479080 ARID4AP29374 1257 aaPredicted RBP16.06■□□□□ 0.16
CHD3-210ENST00000479080 PRELPP51888 382 aa16.06■□□□□ 0.16
CHD3-210ENST00000479080 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
CHD3-210ENST00000479080 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
CHD3-210ENST00000479080 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
CHD3-210ENST00000479080 ZBTB47Q9UFB7 747 aaPredicted RBP16.06■□□□□ 0.16
CHD3-210ENST00000479080 ARFGEF1Q9Y6D6 1849 aa16.05■□□□□ 0.16
CHD3-210ENST00000479080 MCAMP43121 646 aa16.05■□□□□ 0.16
CHD3-210ENST00000479080 EDC3Q96F86 508 aaKnown RBP16.05■□□□□ 0.16
CHD3-210ENST00000479080 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
CHD3-210ENST00000479080 FER1L6Q2WGJ9 1857 aa16.05■□□□□ 0.16
CHD3-210ENST00000479080 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
CHD3-210ENST00000479080 KCNJ4P48050 445 aa16.04■□□□□ 0.16
CHD3-210ENST00000479080 RASGRF1Q13972 1273 aa16.04■□□□□ 0.16
CHD3-210ENST00000479080 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
CHD3-210ENST00000479080 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
CHD3-210ENST00000479080 BOLA2Q9H3K6 86 aa16.04■□□□□ 0.16
CHD3-210ENST00000479080 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
CHD3-210ENST00000479080 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
CHD3-210ENST00000479080 MAP4K4O95819 1239 aaPredicted RBP16.03■□□□□ 0.16
CHD3-210ENST00000479080 YBX3P16989 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHD3-210ENST00000479080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHD3-210ENST00000479080 PSMD1Q99460 953 aa16.03■□□□□ 0.16
CHD3-210ENST00000479080 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
CHD3-210ENST00000479080 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
CHD3-210ENST00000479080 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 ZBTB22O15209 634 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 GLRX3O76003 335 aaKnown RBP16.02■□□□□ 0.16
CHD3-210ENST00000479080 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHD3-210ENST00000479080 RASSF7Q02833 373 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 TTC39AQ5SRH9 613 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 HAUS7Q99871 368 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 ANTXR1Q9H6X2 564 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 SNRKQ9NRH2 765 aa16.02■□□□□ 0.16
CHD3-210ENST00000479080 SDSP20132 328 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
CHD3-210ENST00000479080 ZAP70P43403 619 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 BMP2KLQ5H9B9 411 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 CCDC158Q5M9N0 1113 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 RTKN2Q8IZC4 609 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
CHD3-210ENST00000479080 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
CHD3-210ENST00000479080 CHGBP05060 677 aa16■□□□□ 0.15
CHD3-210ENST00000479080 IL1R1P14778 569 aa16■□□□□ 0.15
CHD3-210ENST00000479080 AOC3Q16853 763 aa16■□□□□ 0.15
CHD3-210ENST00000479080 GORABQ5T7V8 394 aa16■□□□□ 0.15
CHD3-210ENST00000479080 GPATCH3Q96I76 525 aa16■□□□□ 0.15
CHD3-210ENST00000479080 PIH1D3Q9NQM4 214 aaKnown RBP16■□□□□ 0.15
CHD3-210ENST00000479080 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
CHD3-210ENST00000479080 LTBP3Q9NS15 1303 aa15.99■□□□□ 0.15
CHD3-210ENST00000479080 ERC2O15083 957 aa15.99■□□□□ 0.15
CHD3-210ENST00000479080 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
CHD3-210ENST00000479080 UQCRFS1P1P0C7P4 283 aa15.99■□□□□ 0.15
CHD3-210ENST00000479080 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
CHD3-210ENST00000479080 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
CHD3-210ENST00000479080 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
CHD3-210ENST00000479080 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
CHD3-210ENST00000479080 CHD4Q14839 1912 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 YDJCA8MPS7 323 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 GRIPAP1Q4V328 841 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 CAVIN4Q5BKX8 364 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 SPATA5Q8NB90 893 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 EYA3Q99504 573 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 DBNDD1Q9H9R9 158 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 JAG2Q9Y219 1238 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
CHD3-210ENST00000479080 PDS5AQ29RF7 1337 aaKnown RBP15.97■□□□□ 0.15
CHD3-210ENST00000479080 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
CHD3-210ENST00000479080 GOLIM4O00461 696 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms