RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 CRAMP1Q96RY5 1269 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 ZNRF3Q9ULT6 936 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 PAPPA2Q9BXP8 1791 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 DUOX1Q9NRD9 1551 aa10.31□□□□□ -0.76
VPS45-208ENST00000478999 LRRC37AA6NMS7 1700 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
VPS45-208ENST00000478999 CDC45O75419 566 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 RAD17O75943 681 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 NTSR2O95665 410 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 HOXD11P31277 338 aaPredicted RBP10.3□□□□□ -0.76
VPS45-208ENST00000478999 ANKRD45Q5TZF3 282 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 ZNF34Q8IZ26 560 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 CSRNP1Q96S65 589 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 GBA2Q9HCG7 927 aaPredicted RBP10.3□□□□□ -0.76
VPS45-208ENST00000478999 CHPF2Q9P2E5 772 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 TRMT112Q9UI30 125 aaKnown RBP10.3□□□□□ -0.76
VPS45-208ENST00000478999 SCN9AQ15858 1988 aa10.3□□□□□ -0.76
VPS45-208ENST00000478999 GNAI3P08754 354 aa10.29□□□□□ -0.76
VPS45-208ENST00000478999 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
VPS45-208ENST00000478999 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
VPS45-208ENST00000478999 DDX46Q7L014 1031 aaKnown RBP10.29□□□□□ -0.76
VPS45-208ENST00000478999 SIRT2Q8IXJ6 389 aa10.29□□□□□ -0.76
VPS45-208ENST00000478999 SUPT20HQ8NEM7 779 aa10.29□□□□□ -0.76
VPS45-208ENST00000478999 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
VPS45-208ENST00000478999 VPS33BQ9H267 617 aa10.29□□□□□ -0.76
VPS45-208ENST00000478999 CNOT7Q9UIV1 285 aaKnown RBP10.29□□□□□ -0.76
VPS45-208ENST00000478999 PSME4Q14997 1843 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 YDJCA8MPS7 323 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 EGFRP00533 1210 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 SLC4A2P04920 1241 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 SLC10A3P09131 477 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 CEP85Q6P2H3 762 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 CASC1Q6TDU7 716 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 HSCBQ8IWL3 235 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
VPS45-208ENST00000478999 TBC1D2Q9BYX2 928 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 ANTXR1Q9H6X2 564 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 DBF4Q9UBU7 674 aaPredicted RBP10.28□□□□□ -0.76
VPS45-208ENST00000478999 ATP6V0A2Q9Y487 856 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 SH3TC1Q8TE82 1336 aa10.28□□□□□ -0.76
VPS45-208ENST00000478999 ADM5C9JUS6 153 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 HCLS1P14317 486 aaPredicted RBP10.27□□□□□ -0.77
VPS45-208ENST00000478999 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
VPS45-208ENST00000478999 KIAA2012Q0VF49 1180 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 PDIA6Q15084 440 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 DPP8Q6V1X1 898 aaPredicted RBP10.27□□□□□ -0.77
VPS45-208ENST00000478999 KRT26Q7Z3Y9 468 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 NLRP10Q86W26 655 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 HYPKQ9NX55 129 aa10.27□□□□□ -0.77
VPS45-208ENST00000478999 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
VPS45-208ENST00000478999 ZBTB12Q9Y330 459 aaPredicted RBP10.27□□□□□ -0.77
VPS45-208ENST00000478999 H7C1D1 291 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 GNAI2P04899 355 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 FXR1P51114 621 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS45-208ENST00000478999 TCIRG1Q13488 830 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 TNIP1Q15025 636 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 PKN2Q16513 984 aaKnown RBP10.26□□□□□ -0.77
VPS45-208ENST00000478999 TTC22Q5TAA0 569 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 RASAL3Q86YV0 1011 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 MPNDQ8N594 471 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 PLBD2Q8NHP8 589 aa10.26□□□□□ -0.77
VPS45-208ENST00000478999 RNF216Q9NWF9 866 aaPredicted RBP10.26□□□□□ -0.77
VPS45-208ENST00000478999 PTMSP20962 102 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 SLC4A3P48751 1232 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 TBC1D10BQ4KMP7 808 aaPredicted RBP10.25□□□□□ -0.77
VPS45-208ENST00000478999 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 ZNF296Q8WUU4 475 aaPredicted RBP10.25□□□□□ -0.77
VPS45-208ENST00000478999 OSBPL3Q9H4L5 887 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 C1orf115Q9H7X2 142 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 CHMP5Q9NZZ3 219 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 HDAC9Q9UKV0 1011 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 HDAC5Q9UQL6 1122 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 HTTP42858 3142 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 AOX1Q06278 1338 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 CENPFP49454 3210 aa10.25□□□□□ -0.77
VPS45-208ENST00000478999 KIAA0100Q14667 2235 aaKnown RBP10.24□□□□□ -0.77
VPS45-208ENST00000478999 ATP5J2-PTCD1G3V325 749 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 G3V3G9 751 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 PSMD14O00487 310 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 BBOX1O75936 387 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 HSP90B1P14625 803 aaKnown RBP10.24□□□□□ -0.77
VPS45-208ENST00000478999 FLIIQ13045 1269 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 GRAPQ13588 217 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 GSE1Q14687 1217 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 SLC10A5Q5PT55 438 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 DCAF8Q5TAQ9 597 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 TBC1D9Q6ZT07 1266 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 TMC4Q7Z404 712 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 LRP10Q7Z4F1 713 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 SP8Q8IXZ3 490 aa10.24□□□□□ -0.77
VPS45-208ENST00000478999 GRAPLQ8TC17 118 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms