RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ZNF646O15015 1829 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-215ENST00000478531 PNMA6EA0A0J9YXQ4 647 aa8.58□□□□□ -1.04
BRCA1-215ENST00000478531 EYA2O00167 538 aa8.58□□□□□ -1.04
BRCA1-215ENST00000478531 CXCL9Q07325 125 aa8.58□□□□□ -1.04
BRCA1-215ENST00000478531 PDE3AQ14432 1141 aa8.58□□□□□ -1.04
BRCA1-215ENST00000478531 TXNRD3Q86VQ6 643 aa8.58□□□□□ -1.04
BRCA1-215ENST00000478531 GPC2Q8N158 579 aa8.58□□□□□ -1.04
BRCA1-215ENST00000478531 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 MTX1Q13505 466 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 CIAPIN1Q6FI81 312 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 C16orf71Q8IYS4 520 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-215ENST00000478531 KCNQ5Q9NR82 932 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 PSMD14O00487 310 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 TNIP1Q15025 636 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 ATG9AQ7Z3C6 839 aa8.57□□□□□ -1.04
BRCA1-215ENST00000478531 KIF3CO14782 793 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 CIAO1O76071 339 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 PDE8BO95263 885 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 VEGFAP15692 232 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-215ENST00000478531 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-215ENST00000478531 GMPSP49915 693 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-215ENST00000478531 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-215ENST00000478531 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
BRCA1-215ENST00000478531 CEP85Q6P2H3 762 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 ZNF804AQ7Z570 1209 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 VGLL2Q8N8G2 317 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-215ENST00000478531 COPRSQ9NQ92 184 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 PCNTO95613 3336 aa8.56□□□□□ -1.04
BRCA1-215ENST00000478531 IQCA1LA6NCM1 817 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 POTECB2RU33 542 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 IL15P40933 162 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-215ENST00000478531 GYG1P46976 350 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 ATP8B2P98198 1209 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 UBE4AQ14139 1066 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 COA1Q9GZY4 146 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 CHMP4BQ9H444 224 aaKnown RBP8.55□□□□□ -1.04
BRCA1-215ENST00000478531 ZBTB40Q9NUA8 1239 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 CEP126Q9P2H0 1117 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 HACL1Q9UJ83 578 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 ZBTB12Q9Y330 459 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-215ENST00000478531 IRS2Q9Y4H2 1338 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 SLC5A1P13866 664 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 SCNN1DP51172 638 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.04
BRCA1-215ENST00000478531 EAPPQ56P03 285 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-215ENST00000478531 PODNQ7Z5L7 613 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 SSH3Q8TE77 659 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
BRCA1-215ENST00000478531 IQSEC3Q9UPP2 1182 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-215ENST00000478531 SHTN1A0MZ66 631 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 USP17L3A6NCW0 530 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 USP17L4A6NCW7 530 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 SURF6O75683 361 aaKnown RBP8.54□□□□□ -1.04
BRCA1-215ENST00000478531 IFIT1P09914 478 aaKnown RBP8.54□□□□□ -1.04
BRCA1-215ENST00000478531 EPS15P42566 896 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 TFCP2Q12800 502 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 POLA2Q14181 598 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 ATP2B3Q16720 1220 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 USP17L1Q7RTZ2 530 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 CRBNQ96SW2 442 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 MXD3Q9BW11 206 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 CD209Q9NNX6 404 aa8.54□□□□□ -1.04
BRCA1-215ENST00000478531 FRAT2O75474 233 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 POTEIP0CG38 1075 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 POTEJP0CG39 1038 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 HIBADHP31937 336 aaKnown RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 EPHX2P34913 555 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 GTF2IP78347 998 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 CAVIN4Q5BKX8 364 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 C15orf52Q6ZUT6 534 aaKnown RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 MICALL2Q8IY33 904 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 LPIN2Q92539 896 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 TAF1DQ9H5J8 278 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 GPRC5DQ9NZD1 345 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 EXOC6BQ9Y2D4 811 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 SUPT16HQ9Y5B9 1047 aaKnown RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 ADAMTSL1Q8N6G6 1762 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 ZNF609O15014 1411 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 APBB1O00213 710 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 HMMRO75330 724 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 FGFR2P21802 821 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 BCAMP50895 628 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 TTLL5Q6EMB2 1281 aa8.53□□□□□ -1.04
BRCA1-215ENST00000478531 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 FAM84BQ96KN1 310 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 CNOT7Q9UIV1 285 aaKnown RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-215ENST00000478531 POLR2AP24928 1970 aaKnown RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 TOMM70O94826 608 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 VIL1P09327 827 aaKnown RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 IL1R1P14778 569 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 ADORA1P30542 326 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 CHAF1AQ13111 956 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 DACT2Q5SW24 774 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 CLEC11AQ9Y240 323 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms