RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-215	ENST00000478452	G2E3	Q7L622	706 aa		11.24	□□□□□ -0.61
MMS19-215	ENST00000478452	WWC1	Q8IX03	1113 aa		11.24	□□□□□ -0.61
MMS19-215	ENST00000478452	MPHOSPH8	Q99549	860 aa		11.24	□□□□□ -0.61
MMS19-215	ENST00000478452	ANKRD2	Q9GZV1	360 aa		11.24	□□□□□ -0.61
MMS19-215	ENST00000478452	SCAF8	Q9UPN6	1271 aa	Known RBP	11.24	□□□□□ -0.61
MMS19-215	ENST00000478452	PITPNM2	Q9BZ72	1349 aa		11.24	□□□□□ -0.61
MMS19-215	ENST00000478452	UBE2Q2L	H0YL09	131 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	MMP14	P50281	582 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	TTLL12	Q14166	644 aa	Predicted RBP	11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	GCKR	Q14397	625 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	DACT2	Q5SW24	774 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	UBE3B	Q7Z3V4	1068 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	MXD3	Q9BW11	206 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	ANKRD36C	Q5JPF3	1778 aa		11.23	□□□□□ -0.61
MMS19-215	ENST00000478452	ZNF804B	A4D1E1	1349 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	WNT10B	O00744	389 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	CSF1R	P07333	972 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	ITGA6	P23229	1130 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	NF2	P35240	595 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	MOB2	Q70IA6	237 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	TXNRD3	Q86VQ6	643 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	RASAL3	Q86YV0	1011 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	MYO3B	Q8WXR4	1341 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	HDAC9	Q9UKV0	1011 aa		11.22	□□□□□ -0.61
MMS19-215	ENST00000478452	MED23	Q9ULK4	1368 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	KCNJ4	P48050	445 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	GTF2I	P78347	998 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	FLII	Q13045	1269 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	FKBP5	Q13451	457 aa	Predicted RBP	11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	CCDC184	Q52MB2	194 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	PLA2G12B	Q9BX93	195 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	MYH16	Q9H6N6	1097 aa		11.21	□□□□□ -0.61
MMS19-215	ENST00000478452	ANKRD18B	A2A2Z9	1011 aa		11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	TM4SF4	P48230	202 aa		11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	NCBP3	Q53F19	620 aa	Known RBP	11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	CTU1	Q7Z7A3	348 aa	Known RBP	11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	KIAA0825	Q8IV33	1275 aa		11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	LINS1	Q8NG48	757 aa		11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	DNAAF4	Q8WXU2	420 aa		11.2	□□□□□ -0.62
MMS19-215	ENST00000478452	ZNF609	O15014	1411 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	TAF1	P21675	1872 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	IL16	Q14005	1332 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	VAMP4	O75379	141 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	TBC1D8	O95759	1140 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	CASP7	P55210	303 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	CHRND	Q07001	517 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	IFIT5	Q13325	482 aa	Known RBP	11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	ARMC9	Q7Z3E5	817 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	CD209	Q9NNX6	404 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	SALL2	Q9Y467	1007 aa	Predicted RBP	11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	COL4A1	P02462	1669 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	TRPM7	Q96QT4	1865 aa		11.19	□□□□□ -0.62
MMS19-215	ENST00000478452	LAMB2	P55268	1798 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	THSD7B	Q9C0I4	1608 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	SASH1	O94885	1247 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	KLRK1	P26718	216 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	MKRN3	Q13064	507 aa	Known RBP	11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	PRKG1	Q13976	671 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	DLGAP5	Q15398	846 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	PKN2	Q16513	984 aa	Known RBP	11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	WDR63	Q8IWG1	891 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	LRRC37A	A6NMS7	1700 aa		11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	DDX60	Q8IY21	1712 aa	Known RBP	11.18	□□□□□ -0.62
MMS19-215	ENST00000478452	TAF5L	O75529	589 aa		11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	PTPN12	Q05209	780 aa	Known RBP	11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	SREBF2	Q12772	1141 aa		11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	HELB	Q8NG08	1087 aa	Predicted RBP	11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	SLC10A4	Q96EP9	437 aa		11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	DEFB129	Q9H1M3	183 aa		11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	CHMP3	Q9Y3E7	222 aa		11.17	□□□□□ -0.62
MMS19-215	ENST00000478452	GPR25	O00155	361 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	SNAP23	O00161	211 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	SLC34A2	O95436	690 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	SOX10	P56693	466 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	INHBE	P58166	350 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	FOXO4	P98177	505 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	EXOSC9	Q06265	439 aa	Known RBP	11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	CCDC57	Q2TAC2	916 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	LDLRAD1	Q5T700	205 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	C15orf52	Q6ZUT6	534 aa	Known RBP	11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	MRS2	Q9HD23	443 aa		11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	ANGEL1	Q9UNK9	670 aa	Known RBP	11.16	□□□□□ -0.62
MMS19-215	ENST00000478452	MYO1B	O43795	1136 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	PPP1R12B	O60237	982 aa	Predicted RBP	11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	PLIN1	O60240	522 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	TAF7L	Q5H9L4	462 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	BEND3	Q5T5X7	828 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	LMBR1L	Q6UX01	489 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	LDHAL6A	Q6ZMR3	332 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	ZNF804A	Q7Z570	1209 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	ZBED3	Q96IU2	234 aa	Predicted RBP	11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	HPS5	Q9UPZ3	1129 aa		11.15	□□□□□ -0.62
MMS19-215	ENST00000478452	FANCI	Q9NVI1	1328 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452		F6X3S4	739 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452		F8W031	263 aa	Predicted RBP	11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	ALDH1A1	P00352	501 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	IL1R1	P14778	569 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms