RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 AFF1P51825 1210 aaKnown RBP6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 KIAA0319Q5VV43 1072 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 C8orf86Q6ZUL3 223 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 PODNQ7Z5L7 613 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 FBXO33Q7Z6M2 555 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 EPS8L3Q8TE67 593 aaKnown RBP6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 EHD4Q9H223 541 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 MKL2Q9ULH7 1088 aa6.82□□□□□ -1.32
SMARCA1-204ENST00000478420 FAM177BA6PVY3 158 aa6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 NFKBIEO00221 500 aa6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 HOXB4P17483 251 aaPredicted RBP6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 IRS1P35568 1242 aa6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 SNRPNP63162 240 aaKnown RBP6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 GDF6Q6KF10 455 aaPredicted RBP6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 BEND7Q8N7W2 519 aaPredicted RBP6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 TMEM102Q8N9M5 508 aaPredicted RBP6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 TRIM33Q9UPN9 1127 aa6.81□□□□□ -1.32
SMARCA1-204ENST00000478420 PTPRAP18433 802 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 PI16Q6UXB8 463 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 GIPC2Q8TF65 315 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 HHIPQ96QV1 700 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 LACRTQ9GZZ8 138 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 SUV39H2Q9H5I1 410 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 LIN7BQ9HAP6 207 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 PPP4R2Q9NY27 417 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 SPG7Q9UQ90 795 aa6.8□□□□□ -1.32
SMARCA1-204ENST00000478420 GNB5O14775 395 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 NID1P14543 1247 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 SUZ12Q15022 739 aaKnown RBP6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 GRIK5Q16478 980 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 MSL1Q68DK7 614 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 LINC00114Q6XXX2 140 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 CCNJLQ8IV13 435 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 IL22RA1Q8N6P7 574 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 RGS22Q8NE09 1264 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 ASAP3Q8TDY4 903 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 FRMD6Q96NE9 622 aa6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 DUSP9Q99956 384 aaKnown RBP6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 BHLHE41Q9C0J9 482 aaPredicted RBP6.79□□□□□ -1.32
SMARCA1-204ENST00000478420 GIPC1O14908 333 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 CDC27P30260 824 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 GNA15P30679 374 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 XPCQ01831 940 aaPredicted RBP6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 COL9A3Q14050 684 aaPredicted RBP6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 GRM2Q14416 872 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 TCF12Q99081 682 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 BCO2Q9BYV7 579 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 BCL11AQ9H165 835 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 MUC3BQ9H195 1237 aa6.78□□□□□ -1.32
SMARCA1-204ENST00000478420 CNTNAP5Q8WYK1 1306 aa6.77□□□□□ -1.32
SMARCA1-204ENST00000478420 SPDYE3A6NKU9 549 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 CABP4P57796 275 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 TAGLNQ01995 201 aaKnown RBP6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 PRPF40BQ6NWY9 871 aaKnown RBP6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 BSNDQ8WZ55 320 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 NOP53Q9NZM5 478 aaKnown RBP6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 PPME1Q9Y570 386 aa6.77□□□□□ -1.33
SMARCA1-204ENST00000478420 A0A096LPE4 126 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 A0A1W2PPZ6 126 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 METTL12A8MUP2 240 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 ITGAEP38570 1179 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 BAG6P46379 1132 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 DMRTC2Q8IXT2 367 aaPredicted RBP6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 FOXD4L4Q8WXT5 416 aaPredicted RBP6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 TRIM11Q96F44 468 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 PLVAPQ9BX97 442 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
SMARCA1-204ENST00000478420 TMEM238LA0A1B0GVL6 79 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 RBM47A0AV96 593 aaKnown RBP6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 ZNF16P17020 682 aaPredicted RBP6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 GRIA4P48058 902 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 PSMD2Q13200 908 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 SPRED3Q2MJR0 410 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 FAM117BQ6P1L5 589 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 GLIS3Q8NEA6 775 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 OSBPL7Q9BZF2 842 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 C12orf49Q9H741 205 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 ABCB6Q9NP58 842 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 SOX13Q9UN79 622 aa6.75□□□□□ -1.33
SMARCA1-204ENST00000478420 RNF225M0QZC1 329 aaPredicted RBP6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 XRCC5P13010 732 aaKnown RBP6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 EPHA1P21709 976 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 EIF4BP23588 611 aaKnown RBP6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 CDC25BP30305 580 aa6.74□□□□□ -1.33
SMARCA1-204ENST00000478420 FCGRTP55899 365 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms