RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 KLHL23Q8NBE8 558 aa8.72□□□□□ -1.01
LMBR1-216ENST00000477983 RNF112Q9ULX5 631 aa8.72□□□□□ -1.01
LMBR1-216ENST00000477983 FSCN2O14926 492 aa8.71□□□□□ -1.02
LMBR1-216ENST00000477983 PTPRAP18433 802 aa8.71□□□□□ -1.02
LMBR1-216ENST00000477983 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
LMBR1-216ENST00000477983 DNM1Q05193 864 aaKnown RBP8.71□□□□□ -1.02
LMBR1-216ENST00000477983 ALKBH2Q6NS38 261 aa8.71□□□□□ -1.02
LMBR1-216ENST00000477983 PMEPA1Q969W9 287 aa8.71□□□□□ -1.02
LMBR1-216ENST00000477983 KCNK4Q9NYG8 393 aa8.71□□□□□ -1.02
LMBR1-216ENST00000477983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.71□□□□□ -1.02
LMBR1-216ENST00000477983 HYAL3O43820 417 aaPredicted RBP8.7□□□□□ -1.02
LMBR1-216ENST00000477983 MPSTP25325 297 aa8.7□□□□□ -1.02
LMBR1-216ENST00000477983 AGGF1Q8N302 714 aaeCLIP8.7□□□□□ -1.022e-17■■■■■ 34.4
LMBR1-216ENST00000477983 UBL7Q96S82 380 aaPredicted RBP8.7□□□□□ -1.02
LMBR1-216ENST00000477983 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
LMBR1-216ENST00000477983 SH2B1Q9NRF2 756 aaPredicted RBP8.7□□□□□ -1.02
LMBR1-216ENST00000477983 KANSL3Q9P2N6 904 aa8.7□□□□□ -1.02
LMBR1-216ENST00000477983 EPHA1P21709 976 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 CES1P23141 567 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 FAM117BQ6P1L5 589 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 WNT8BQ93098 351 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 CHRDQ9H2X0 955 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 DZANK1Q9NVP4 752 aa8.69□□□□□ -1.02
LMBR1-216ENST00000477983 WISP1O95388 367 aa8.68□□□□□ -1.02
LMBR1-216ENST00000477983 PHLDB3Q6NSJ2 640 aa8.68□□□□□ -1.02
LMBR1-216ENST00000477983 A6NHS1 94 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 TTC16Q8NEE8 873 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 KLHDC7BQ96G42 594 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 OSGEPQ9NPF4 335 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 POLIQ9UNA4 740 aa8.67□□□□□ -1.02
LMBR1-216ENST00000477983 H3BRJ5 948 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 FAM13AO94988 1023 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 ACPPP15309 386 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 GLB1P16278 677 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 FSTP19883 344 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 CDC25BP30305 580 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 TMEM102Q8N9M5 508 aaPredicted RBP8.66□□□□□ -1.02
LMBR1-216ENST00000477983 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 CEP41Q9BYV8 373 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 RAXQ9Y2V3 346 aa8.66□□□□□ -1.02
LMBR1-216ENST00000477983 FAM177BA6PVY3 158 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 PDE2AO00408 941 aaPredicted RBP8.65□□□□□ -1.02
LMBR1-216ENST00000477983 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 EHHADHQ08426 723 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 SF3B2Q13435 895 aaKnown RBP8.65□□□□□ -1.02
LMBR1-216ENST00000477983 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 UVSSAQ2YD98 709 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 ACAD11Q709F0 780 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 C14orf37Q86TY3 774 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 ARMC10Q8N2F6 343 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
LMBR1-216ENST00000477983 MTMR7Q9Y216 660 aa8.65□□□□□ -1.02
LMBR1-216ENST00000477983 ADAM11O75078 769 aa8.64□□□□□ -1.03
LMBR1-216ENST00000477983 TNFRSF21O75509 655 aa8.64□□□□□ -1.03
LMBR1-216ENST00000477983 USP5P45974 858 aa8.64□□□□□ -1.03
LMBR1-216ENST00000477983 CABP4P57796 275 aa8.64□□□□□ -1.03
LMBR1-216ENST00000477983 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
LMBR1-216ENST00000477983 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
LMBR1-216ENST00000477983 FAM46AQ96IP4 442 aaKnown RBP8.64□□□□□ -1.03
LMBR1-216ENST00000477983 SOX13Q9UN79 622 aa8.64□□□□□ -1.03
LMBR1-216ENST00000477983 DDX3YO15523 660 aaKnown RBP8.63□□□□□ -1.03
LMBR1-216ENST00000477983 FZD6O60353 706 aa8.63□□□□□ -1.03
LMBR1-216ENST00000477983 LCE3BQ5TA77 95 aa8.63□□□□□ -1.03
LMBR1-216ENST00000477983 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
LMBR1-216ENST00000477983 STOML1Q9UBI4 398 aa8.63□□□□□ -1.03
LMBR1-216ENST00000477983 GSC2O15499 205 aa8.62□□□□□ -1.03
LMBR1-216ENST00000477983 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
LMBR1-216ENST00000477983 TRPA1O75762 1119 aa8.62□□□□□ -1.03
LMBR1-216ENST00000477983 HHIPQ96QV1 700 aa8.62□□□□□ -1.03
LMBR1-216ENST00000477983 OSMRQ99650 979 aa8.62□□□□□ -1.03
LMBR1-216ENST00000477983 EREGO14944 169 aa8.61□□□□□ -1.03
LMBR1-216ENST00000477983 IGLV1-40P01703 118 aa8.61□□□□□ -1.03
LMBR1-216ENST00000477983 SNX29Q8TEQ0 813 aa8.61□□□□□ -1.03
LMBR1-216ENST00000477983 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 PHACTR2O75167 634 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 EDN3P14138 238 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 AAMPQ13685 434 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 GJD3Q8N144 294 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 UBASH3BQ8TF42 649 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 MYRFLQ96LU7 910 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 ZKSCAN3Q9BRR0 538 aa8.6□□□□□ -1.03
LMBR1-216ENST00000477983 MEGF11A6BM72 1044 aa8.59□□□□□ -1.03
LMBR1-216ENST00000477983 SOX1O00570 391 aaPredicted RBP8.59□□□□□ -1.03
LMBR1-216ENST00000477983 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
LMBR1-216ENST00000477983 UTP4Q969X6 686 aaKnown RBP8.59□□□□□ -1.03
LMBR1-216ENST00000477983 FOXD3Q9UJU5 478 aaPredicted RBP8.59□□□□□ -1.03
LMBR1-216ENST00000477983 ARL4DP49703 201 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 C19orf57Q0VDD7 668 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 PEAR1Q5VY43 1037 aaPredicted RBP8.58□□□□□ -1.04
LMBR1-216ENST00000477983 ANKRD34AQ69YU3 496 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 KRTAP4-12Q9BQ66 201 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 BHLHE41Q9C0J9 482 aaPredicted RBP8.58□□□□□ -1.04
LMBR1-216ENST00000477983 RNF208Q9H0X6 261 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 ZFYVE28Q9HCC9 887 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms