RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 MYH15Q9Y2K3 1946 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 TAF1LQ8IZX4 1826 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 CLCN1P35523 988 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 TIMM10P62072 90 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 ARXQ96QS3 562 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 LLPHQ9BRT6 129 aaKnown RBP14.51□□□□□ -0.09
PTPRF-212ENST00000477970 GOLIM4O00461 696 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 CCDC158Q5M9N0 1113 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 FAM182BQ5T319 152 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 GTF3C6Q969F1 213 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 ZNF594Q96JF6 807 aaPredicted RBP14.51□□□□□ -0.09
PTPRF-212ENST00000477970 RRAGDQ9NQL2 400 aaPredicted RBP14.51□□□□□ -0.09
PTPRF-212ENST00000477970 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 TRIM37O94972 964 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 IFIT5Q13325 482 aaKnown RBP14.51□□□□□ -0.09
PTPRF-212ENST00000477970 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
PTPRF-212ENST00000477970 BCORQ6W2J9 1755 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 CCDC183Q5T5S1 534 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 PUS3Q9BZE2 481 aaKnown RBP14.5□□□□□ -0.09
PTPRF-212ENST00000477970 COL5A3P25940 1745 aaPredicted RBP14.5□□□□□ -0.09
PTPRF-212ENST00000477970 CASZ1Q86V15 1759 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 CNPY2Q9Y2B0 182 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 RIPOR2Q9Y4F9 1068 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 MAST3O60307 1309 aa14.5□□□□□ -0.09
PTPRF-212ENST00000477970 SYCE3A1L190 88 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
PTPRF-212ENST00000477970 LARP6Q9BRS8 491 aaKnown RBP14.49□□□□□ -0.09
PTPRF-212ENST00000477970 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
PTPRF-212ENST00000477970 COL24A1Q17RW2 1714 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 GADD45BO75293 160 aaPredicted RBP14.49□□□□□ -0.09
PTPRF-212ENST00000477970 CTSWP56202 376 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 EXOSC10Q01780 885 aaKnown RBP14.49□□□□□ -0.09
PTPRF-212ENST00000477970 TTLL11Q8NHH1 800 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 XAGE2Q96GT9 111 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 DOCK2Q92608 1830 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 DHX32Q7L7V1 743 aaKnown RBP14.49□□□□□ -0.09
PTPRF-212ENST00000477970 ZNF34Q8IZ26 560 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 NECAB1Q8N987 351 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
PTPRF-212ENST00000477970 HSPD1P10809 573 aaKnown RBP14.48□□□□□ -0.09
PTPRF-212ENST00000477970 LARP1BQ659C4 914 aaKnown RBP14.48□□□□□ -0.09
PTPRF-212ENST00000477970 SMARCC2Q8TAQ2 1214 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 TRIM44Q96DX7 344 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-212ENST00000477970 TSPY26PQ9H489 355 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 PFKFB2O60825 505 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 COL9A3Q14050 684 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-212ENST00000477970 TTC39AQ5SRH9 613 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 VGLL2Q8N8G2 317 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 FAM89AQ96GI7 184 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 PDE8AO60658 829 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 HLFQ16534 295 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 UVSSAQ2YD98 709 aa14.48□□□□□ -0.09
PTPRF-212ENST00000477970 EVCP57679 992 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 Q6ZUG5 572 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 STOX1Q6ZVD7 989 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 CTNNA3Q9UI47 895 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 RTL9Q8NET4 1388 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 WDR19Q8NEZ3 1342 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 ANKRD18BA2A2Z9 1011 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 ESPNB1AK53 854 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 APBA3O96018 575 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 RGS22Q8NE09 1264 aa14.47□□□□□ -0.09
PTPRF-212ENST00000477970 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
PTPRF-212ENST00000477970 ZBTB1Q9Y2K1 713 aa14.46□□□□□ -0.09
PTPRF-212ENST00000477970 KRT85P78386 507 aa14.46□□□□□ -0.09
PTPRF-212ENST00000477970 ITGA6P23229 1130 aa14.46□□□□□ -0.1
PTPRF-212ENST00000477970 TAF7LQ5H9L4 462 aa14.46□□□□□ -0.1
PTPRF-212ENST00000477970 APPBP2Q92624 585 aa14.46□□□□□ -0.1
PTPRF-212ENST00000477970 GDPD2Q9HCC8 539 aa14.46□□□□□ -0.1
PTPRF-212ENST00000477970 M0R2C6 588 aa14.45□□□□□ -0.1
PTPRF-212ENST00000477970 EIF5P55010 431 aaKnown RBP14.45□□□□□ -0.1
PTPRF-212ENST00000477970 DNM1Q05193 864 aaKnown RBP14.45□□□□□ -0.1
PTPRF-212ENST00000477970 ATP2B3Q16720 1220 aa14.45□□□□□ -0.1
PTPRF-212ENST00000477970 ZSCAN25Q6NSZ9 544 aa14.45□□□□□ -0.1
PTPRF-212ENST00000477970 ZNF274Q96GC6 653 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-212ENST00000477970 E7EWF7 191 aa14.45□□□□□ -0.1
PTPRF-212ENST00000477970 IRS4O14654 1257 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-212ENST00000477970 CHGBP05060 677 aa14.45□□□□□ -0.1
PTPRF-212ENST00000477970 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-212ENST00000477970 SCAND2PQ9GZW5 306 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-212ENST00000477970 RGL2O15211 777 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 ADORA1P30542 326 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 EN1Q05925 392 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-212ENST00000477970 CDC37L1Q7L3B6 337 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 ZSCAN16Q9H4T2 348 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-212ENST00000477970 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 VPS37CA5D8V6 355 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-212ENST00000477970 ARID4AP29374 1257 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-212ENST00000477970 HMGN5P82970 282 aaKnown RBP14.44□□□□□ -0.1
PTPRF-212ENST00000477970 DZIP3Q86Y13 1208 aaKnown RBP14.44□□□□□ -0.1
PTPRF-212ENST00000477970 OSBP2Q969R2 916 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 GREM2Q9H772 168 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 SALL1Q9NSC2 1324 aa14.44□□□□□ -0.1
PTPRF-212ENST00000477970 UBN2Q6ZU65 1347 aa14.43□□□□□ -0.1
PTPRF-212ENST00000477970 EZH2Q15910 746 aaKnown RBP14.43□□□□□ -0.1
PTPRF-212ENST00000477970 METTL24Q5JXM2 366 aa14.43□□□□□ -0.1
PTPRF-212ENST00000477970 GORABQ5T7V8 394 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms