RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 CCDC27Q2M243 656 aa8.05□□□□□ -1.12
SMNDC1-205ENST00000477763 MSL1Q68DK7 614 aa8.05□□□□□ -1.12
SMNDC1-205ENST00000477763 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
SMNDC1-205ENST00000477763 DZANK1Q9NVP4 752 aa8.05□□□□□ -1.12
SMNDC1-205ENST00000477763 NFKBIEO00221 500 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 EIF1AYO14602 144 aaKnown RBP8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 MFAP1P55081 439 aaKnown RBP8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 PLCB3Q01970 1234 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 WFDC8Q8IUA0 241 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 CSRNP1Q96S65 589 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 MUC3BQ9H195 1237 aa8.04□□□□□ -1.12
SMNDC1-205ENST00000477763 SPATA31C1P0DKV0 1188 aa8.03□□□□□ -1.12
SMNDC1-205ENST00000477763 PRRT3Q5FWE3 981 aa8.03□□□□□ -1.12
SMNDC1-205ENST00000477763 TRAPPC3LQ5T215 181 aa8.03□□□□□ -1.12
SMNDC1-205ENST00000477763 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
SMNDC1-205ENST00000477763 TRIM33Q9UPN9 1127 aa8.03□□□□□ -1.12
SMNDC1-205ENST00000477763 PTPRAP18433 802 aa8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 BAG6P46379 1132 aa8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 FMR1Q06787 632 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 POP1Q99575 1024 aaKnown RBP8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 OSMRQ99650 979 aa8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 ZKSCAN3Q9BRR0 538 aa8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 ADAM19Q9H013 955 aa8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 SRA1Q9HD15 236 aaKnown RBP8.02□□□□□ -1.13
SMNDC1-205ENST00000477763 A0A0A0MRY4 1105 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 PDE2AO00408 941 aaPredicted RBP8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 POLR3DP05423 398 aaPredicted RBP8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 ACPPP15309 386 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 RAC1P63000 192 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 KIAA0319Q5VV43 1072 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 USPL1Q5W0Q7 1092 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 IL22RA1Q8N6P7 574 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 CCDC74AQ96AQ1 378 aa8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 BHLHE41Q9C0J9 482 aaPredicted RBP8.01□□□□□ -1.13
SMNDC1-205ENST00000477763 A0A1W2PP55 124 aa8□□□□□ -1.13
SMNDC1-205ENST00000477763 CDC27P30260 824 aa8□□□□□ -1.13
SMNDC1-205ENST00000477763 COL19A1Q14993 1142 aa8□□□□□ -1.13
SMNDC1-205ENST00000477763 ENOX2Q16206 610 aaKnown RBP8□□□□□ -1.13
SMNDC1-205ENST00000477763 NXPE3Q969Y0 559 aa8□□□□□ -1.13
SMNDC1-205ENST00000477763 LATS2Q9NRM7 1088 aa8□□□□□ -1.13
SMNDC1-205ENST00000477763 PPME1Q9Y570 386 aa8□□□□□ -1.13
SMNDC1-205ENST00000477763 FAM177BA6PVY3 158 aa7.99□□□□□ -1.13
SMNDC1-205ENST00000477763 ELNP15502 786 aa7.99□□□□□ -1.13
SMNDC1-205ENST00000477763 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
SMNDC1-205ENST00000477763 DCAF11Q8TEB1 546 aa7.99□□□□□ -1.13
SMNDC1-205ENST00000477763 XP32Q5T750 250 aa7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 DNAJC14Q6Y2X3 702 aaPredicted RBP7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 FBXO11Q86XK2 927 aa7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 FBF1Q8TES7 1133 aa7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 HHIPQ96QV1 700 aa7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 LACRTQ9GZZ8 138 aa7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 NPHS2Q9NP85 383 aa7.98□□□□□ -1.13
SMNDC1-205ENST00000477763 PNMA6FA0A0J9YX94 578 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 TRPA1O75762 1119 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 ERCC3P19447 782 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 ADAMTSL4Q6UY14 1074 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 CCNJLQ8IV13 435 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 BSNDQ8WZ55 320 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 NACC1Q96RE7 527 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 SOX13Q9UN79 622 aa7.97□□□□□ -1.13
SMNDC1-205ENST00000477763 ANKRD33BA6NCL7 494 aa7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 CABP4P57796 275 aa7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 ALG1LQ6GMV1 187 aa7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 WNT8BQ93098 351 aa7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 TCF12Q99081 682 aa7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 LIN7BQ9HAP6 207 aa7.96□□□□□ -1.14
SMNDC1-205ENST00000477763 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 H3BRJ5 948 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 DEAF1O75398 565 aaPredicted RBP7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 P4HBP07237 508 aaKnown RBP7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 FURINP09958 794 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 EPHA1P21709 976 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 MAPK8P45983 427 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 ATP2B2Q01814 1243 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 SETDB1Q15047 1291 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 PRPF40BQ6NWY9 871 aaKnown RBP7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 FAM117BQ6P1L5 589 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 EHD4Q9H223 541 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 SH2B1Q9NRF2 756 aaPredicted RBP7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
SMNDC1-205ENST00000477763 C1QTNF9BB2RNN3 333 aa7.94□□□□□ -1.14
SMNDC1-205ENST00000477763 DLL1O00548 723 aa7.94□□□□□ -1.14
SMNDC1-205ENST00000477763 APBA3O96018 575 aa7.94□□□□□ -1.14
SMNDC1-205ENST00000477763 FGD1P98174 961 aa7.94□□□□□ -1.14
SMNDC1-205ENST00000477763 EPS8L3Q8TE67 593 aaKnown RBP7.94□□□□□ -1.14
SMNDC1-205ENST00000477763 LINC01387J3KSC0 135 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 GADD45BO75293 160 aaPredicted RBP7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 PTPN12Q05209 780 aaKnown RBP7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 VN1R5Q7Z5H4 357 aa7.93□□□□□ -1.14
SMNDC1-205ENST00000477763 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms