RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
NIFK-205ENST00000477693 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 GNAI3P08754 354 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 CXCL9Q07325 125 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 COL13A1Q5TAT6 717 aaPredicted RBP12.23□□□□□ -0.45
NIFK-205ENST00000477693 LDHAL6AQ6ZMR3 332 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 ZNF594Q96JF6 807 aaPredicted RBP12.23□□□□□ -0.45
NIFK-205ENST00000477693 GPR101Q96P66 508 aaPredicted RBP12.23□□□□□ -0.45
NIFK-205ENST00000477693 DBNDD1Q9H9R9 158 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 DDX19BQ9UMR2 479 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 SCN4AP35499 1836 aa12.23□□□□□ -0.45
NIFK-205ENST00000477693 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
NIFK-205ENST00000477693 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
NIFK-205ENST00000477693 PLIN1O60240 522 aa12.22□□□□□ -0.45
NIFK-205ENST00000477693 ECE2O60344 883 aa12.22□□□□□ -0.45
NIFK-205ENST00000477693 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
NIFK-205ENST00000477693 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
NIFK-205ENST00000477693 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
NIFK-205ENST00000477693 RBM46Q8TBY0 533 aaKnown RBP12.22□□□□□ -0.45
NIFK-205ENST00000477693 A0A1B0GUL6 1792 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 WTIPA6NIX2 430 aaPredicted RBP12.21□□□□□ -0.45
NIFK-205ENST00000477693 RLBP1P12271 317 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 SCNN1DP51172 638 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 MVPQ14764 893 aaKnown RBP12.21□□□□□ -0.45
NIFK-205ENST00000477693 TNIP1Q15025 636 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.45
NIFK-205ENST00000477693 CNNM1Q9NRU3 951 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 PPP4R2Q9NY27 417 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 HACL1Q9UJ83 578 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
NIFK-205ENST00000477693 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
NIFK-205ENST00000477693 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 IRS2Q9Y4H2 1338 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 RAD17O75943 681 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
NIFK-205ENST00000477693 MTX1Q13505 466 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 PODNQ7Z5L7 613 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
NIFK-205ENST00000477693 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
NIFK-205ENST00000477693 ZNF609O15014 1411 aa12.2□□□□□ -0.46
NIFK-205ENST00000477693 PSMD14O00487 310 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 TAF5LO75529 589 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 GNAI2P04899 355 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 EPHX2P34913 555 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 KCNJ4P48050 445 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
NIFK-205ENST00000477693 FSTL1Q12841 308 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 UBE4AQ14139 1066 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 TXNRD3Q86VQ6 643 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
NIFK-205ENST00000477693 KLRG1Q96E93 195 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 COA1Q9GZY4 146 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
NIFK-205ENST00000477693 G3V3G9 751 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 SNAP23O00161 211 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
NIFK-205ENST00000477693 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
NIFK-205ENST00000477693 RPS12P25398 132 aaKnown RBP12.18□□□□□ -0.46
NIFK-205ENST00000477693 KLRK1P26718 216 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
NIFK-205ENST00000477693 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
NIFK-205ENST00000477693 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 KLHDC4Q8TBB5 520 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 KCNQ5Q9NR82 932 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
NIFK-205ENST00000477693 CIAO1O76071 339 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 EPS15P42566 896 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 GMPSP49915 693 aaPredicted RBP12.17□□□□□ -0.46
NIFK-205ENST00000477693 LDHDQ86WU2 507 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 JMYQ8N9B5 988 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 DPF2Q92785 391 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 SCN9AQ15858 1988 aa12.17□□□□□ -0.46
NIFK-205ENST00000477693 PSME4Q14997 1843 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 EYA2O00167 538 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 SRGAP3O43295 1099 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 PDE8BO95263 885 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 METTL24Q5JXM2 366 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 C20orf194Q5TEA3 1177 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 USP50Q70EL3 339 aaPredicted RBP12.16□□□□□ -0.46
NIFK-205ENST00000477693 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
NIFK-205ENST00000477693 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
NIFK-205ENST00000477693 IL1R1P14778 569 aa12.15□□□□□ -0.46
NIFK-205ENST00000477693 STRIP1Q5VSL9 837 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms