RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TBC1D16Q8TBP0 767 aa19.9■□□□□ 0.78
VHL-203ENST00000477538 NEUROD6Q96NK8 337 aa19.9■□□□□ 0.78
VHL-203ENST00000477538 POLLQ9UGP5 575 aa19.9■□□□□ 0.78
VHL-203ENST00000477538 PSME4Q14997 1843 aa19.9■□□□□ 0.78
VHL-203ENST00000477538 IFIT2P09913 472 aaKnown RBP19.89■□□□□ 0.77
VHL-203ENST00000477538 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
VHL-203ENST00000477538 CCDC8Q9H0W5 538 aaPredicted RBP19.89■□□□□ 0.77
VHL-203ENST00000477538 MYO5AQ9Y4I1 1855 aaKnown RBP19.88■□□□□ 0.77
VHL-203ENST00000477538 SUPT20HQ8NEM7 779 aa19.88■□□□□ 0.77
VHL-203ENST00000477538 GPR101Q96P66 508 aaPredicted RBP19.88■□□□□ 0.77
VHL-203ENST00000477538 RTFDC1Q9BY42 306 aaPredicted RBP19.88■□□□□ 0.77
VHL-203ENST00000477538 MED23Q9ULK4 1368 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 KLRK1P26718 216 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 ADORA1P30542 326 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
VHL-203ENST00000477538 XAGE2Q96GT9 111 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 PSMD1Q99460 953 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 EYA3Q99504 573 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
VHL-203ENST00000477538 TLR7Q9NYK1 1049 aaKnown RBP19.87■□□□□ 0.77
VHL-203ENST00000477538 DBNLQ9UJU6 430 aaKnown RBP19.87■□□□□ 0.77
VHL-203ENST00000477538 SCN9AQ15858 1988 aa19.86■□□□□ 0.77
VHL-203ENST00000477538 MYH7P12883 1935 aa19.86■□□□□ 0.77
VHL-203ENST00000477538 IRS2Q9Y4H2 1338 aa19.86■□□□□ 0.77
VHL-203ENST00000477538 YBX3P16989 372 aaKnown RBP eCLIP19.86■□□□□ 0.778e-9■□□□□ 9.4
VHL-203ENST00000477538 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
VHL-203ENST00000477538 C15orf52Q6ZUT6 534 aaKnown RBP19.86■□□□□ 0.77
VHL-203ENST00000477538 GORABQ5T7V8 394 aa19.85■□□□□ 0.77
VHL-203ENST00000477538 OTUD7AQ8TE49 926 aaPredicted RBP19.85■□□□□ 0.77
VHL-203ENST00000477538 TAOK3Q9H2K8 898 aa19.85■□□□□ 0.77
VHL-203ENST00000477538 ZNF646O15015 1829 aaPredicted RBP19.85■□□□□ 0.77
VHL-203ENST00000477538 SALL3Q9BXA9 1300 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 LTBP3Q9NS15 1303 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 NFKBIEO00221 500 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 PDE4AP27815 886 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 WASHC4Q2M389 1173 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 CAVIN4Q5BKX8 364 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 TXNRD3Q86VQ6 643 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 TIAM2Q8IVF5 1701 aa19.84■□□□□ 0.77
VHL-203ENST00000477538 RIMBP2O15034 1052 aa19.83■□□□□ 0.77
VHL-203ENST00000477538 MX1P20591 662 aa19.83■□□□□ 0.77
VHL-203ENST00000477538 GYG1P46976 350 aa19.83■□□□□ 0.77
VHL-203ENST00000477538 GPR162Q16538 588 aa19.83■□□□□ 0.77
VHL-203ENST00000477538 GPATCH3Q96I76 525 aa19.83■□□□□ 0.77
VHL-203ENST00000477538 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.77
VHL-203ENST00000477538 PHKA1P46020 1223 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 BCAMP50895 628 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 RASSF7Q02833 373 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 CCDC158Q5M9N0 1113 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 CCDC102BQ68D86 513 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 ARHGAP27Q6ZUM4 889 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 ZNF804AQ7Z570 1209 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 SKAP1Q86WV1 359 aa19.82■□□□□ 0.76
VHL-203ENST00000477538 FAM84BQ96KN1 310 aaPredicted RBP19.82■□□□□ 0.76
VHL-203ENST00000477538 ZNF277Q9NRM2 450 aaPredicted RBP19.82■□□□□ 0.76
VHL-203ENST00000477538 DOCK2Q92608 1830 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 PPIP5K2O43314 1243 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 HIBADHP31937 336 aaKnown RBP19.81■□□□□ 0.76
VHL-203ENST00000477538 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 AOC3Q16853 763 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 TTC39AQ5SRH9 613 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 FBXO33Q7Z6M2 555 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 VPS37DQ86XT2 251 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 PLEKHM2Q8IWE5 1019 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 COL4A5P29400 1685 aa19.81■□□□□ 0.76
VHL-203ENST00000477538 TTC41PQ6P2S7 1318 aa19.8■□□□□ 0.76
VHL-203ENST00000477538 IARSP41252 1262 aaKnown RBP19.8■□□□□ 0.76
VHL-203ENST00000477538 PDE1AP54750 535 aa19.8■□□□□ 0.76
VHL-203ENST00000477538 VPS33BQ9H267 617 aa19.8■□□□□ 0.76
VHL-203ENST00000477538 ECHDC1Q9NTX5 307 aa19.8■□□□□ 0.76
VHL-203ENST00000477538 STAP2Q9UGK3 403 aa19.8■□□□□ 0.76
VHL-203ENST00000477538 G3V3G9 751 aa19.79■□□□□ 0.76
VHL-203ENST00000477538 RGS3P49796 1198 aa19.79■□□□□ 0.76
VHL-203ENST00000477538 DCAF8Q5TAQ9 597 aa19.79■□□□□ 0.76
VHL-203ENST00000477538 TSHZ3Q63HK5 1081 aa19.79■□□□□ 0.76
VHL-203ENST00000477538 LARGE2Q8N3Y3 721 aa19.79■□□□□ 0.76
VHL-203ENST00000477538 COA1Q9GZY4 146 aa19.79■□□□□ 0.76
VHL-203ENST00000477538 GNL3LQ9NVN8 582 aaKnown RBP19.79■□□□□ 0.76
VHL-203ENST00000477538 AOX1Q06278 1338 aa19.78■□□□□ 0.76
VHL-203ENST00000477538 SRCAPQ6ZRS2 3230 aa19.78■□□□□ 0.76
VHL-203ENST00000477538 UQCRFS1P1P0C7P4 283 aa19.78■□□□□ 0.76
VHL-203ENST00000477538 ARID4AP29374 1257 aaPredicted RBP19.78■□□□□ 0.76
VHL-203ENST00000477538 OSBPL3Q9H4L5 887 aa19.78■□□□□ 0.76
VHL-203ENST00000477538 ERC2O15083 957 aa19.77■□□□□ 0.76
VHL-203ENST00000477538 GRIN3BO60391 1043 aa19.77■□□□□ 0.76
VHL-203ENST00000477538 ATP5JP18859 108 aa19.77■□□□□ 0.76
VHL-203ENST00000477538 DOK7Q18PE1 504 aa19.77■□□□□ 0.76
VHL-203ENST00000477538 ZNF512BQ96KM6 892 aaPredicted RBP19.77■□□□□ 0.76
VHL-203ENST00000477538 DBNDD1Q9H9R9 158 aa19.77■□□□□ 0.76
VHL-203ENST00000477538 CD209Q9NNX6 404 aa19.77■□□□□ 0.76
VHL-203ENST00000477538 IQSEC3Q9UPP2 1182 aaPredicted RBP19.77■□□□□ 0.76
VHL-203ENST00000477538 GOLGB1Q14789 3259 aaKnown RBP19.77■□□□□ 0.76
VHL-203ENST00000477538 COL1A1P02452 1464 aaPredicted RBP19.76■□□□□ 0.75
VHL-203ENST00000477538 ECE2O60344 883 aa19.76■□□□□ 0.75
VHL-203ENST00000477538 IL1R1P14778 569 aa19.76■□□□□ 0.75
VHL-203ENST00000477538 TDRD7Q8NHU6 1098 aaKnown RBP19.76■□□□□ 0.75
VHL-203ENST00000477538 PI4K2BQ8TCG2 481 aa19.76■□□□□ 0.75
VHL-203ENST00000477538 SEMA3EO15041 775 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
VHL-203ENST00000477538 GLRX3O76003 335 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms