RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ECE2O60344 883 aa16.26■□□□□ 0.19
TOP3A-205ENST00000477508 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
TOP3A-205ENST00000477508 GPC2Q8N158 579 aa16.26■□□□□ 0.19
TOP3A-205ENST00000477508 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
TOP3A-205ENST00000477508 NOP58Q9Y2X3 529 aaKnown RBP16.26■□□□□ 0.19
TOP3A-205ENST00000477508 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
TOP3A-205ENST00000477508 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
TOP3A-205ENST00000477508 IFIT1P09914 478 aaKnown RBP16.25■□□□□ 0.19
TOP3A-205ENST00000477508 DOK7Q18PE1 504 aa16.25■□□□□ 0.19
TOP3A-205ENST00000477508 CIAPIN1Q6FI81 312 aa16.25■□□□□ 0.19
TOP3A-205ENST00000477508 ZNF804AQ7Z570 1209 aa16.25■□□□□ 0.19
TOP3A-205ENST00000477508 ZNF784Q8NCA9 323 aaPredicted RBP16.25■□□□□ 0.19
TOP3A-205ENST00000477508 LPIN2Q92539 896 aa16.25■□□□□ 0.19
TOP3A-205ENST00000477508 DBNDD1Q9H9R9 158 aa16.25■□□□□ 0.19
TOP3A-205ENST00000477508 GPBP1L1Q9HC44 474 aaPredicted RBP16.25■□□□□ 0.19
TOP3A-205ENST00000477508 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
TOP3A-205ENST00000477508 COL4A5P29400 1685 aa16.24■□□□□ 0.19
TOP3A-205ENST00000477508 WTIPA6NIX2 430 aaPredicted RBP16.24■□□□□ 0.19
TOP3A-205ENST00000477508 SLC5A1P13866 664 aa16.24■□□□□ 0.19
TOP3A-205ENST00000477508 CXCL9Q07325 125 aa16.24■□□□□ 0.19
TOP3A-205ENST00000477508 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
TOP3A-205ENST00000477508 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
TOP3A-205ENST00000477508 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
TOP3A-205ENST00000477508 SNAP23O00161 211 aa16.23■□□□□ 0.19
TOP3A-205ENST00000477508 FGFR2P21802 821 aa16.23■□□□□ 0.19
TOP3A-205ENST00000477508 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
TOP3A-205ENST00000477508 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 YDJCA8MPS7 323 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-205ENST00000477508 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-205ENST00000477508 HIBADHP31937 336 aaKnown RBP16.22■□□□□ 0.19
TOP3A-205ENST00000477508 ATP2B3Q16720 1220 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 ZNF526Q8TF50 670 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-205ENST00000477508 L3MBTL3Q96JM7 780 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-205ENST00000477508 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
TOP3A-205ENST00000477508 USP17L3A6NCW0 530 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 USP17L4A6NCW7 530 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 RAD17O75943 681 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 IL1R1P14778 569 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 RPS12P25398 132 aaKnown RBP16.21■□□□□ 0.19
TOP3A-205ENST00000477508 KLRK1P26718 216 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 TFCP2Q12800 502 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 USP17L1Q7RTZ2 530 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 FAM84BQ96KN1 310 aaPredicted RBP16.21■□□□□ 0.19
TOP3A-205ENST00000477508 GPR108Q9NPR9 543 aa16.21■□□□□ 0.19
TOP3A-205ENST00000477508 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
TOP3A-205ENST00000477508 VIL1P09327 827 aaKnown RBP16.2■□□□□ 0.18
TOP3A-205ENST00000477508 STRIP1Q5VSL9 837 aa16.2■□□□□ 0.18
TOP3A-205ENST00000477508 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
TOP3A-205ENST00000477508 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
TOP3A-205ENST00000477508 PSMD14O00487 310 aa16.19■□□□□ 0.18
TOP3A-205ENST00000477508 SASH1O94885 1247 aa16.19■□□□□ 0.18
TOP3A-205ENST00000477508 CENPBP07199 599 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-205ENST00000477508 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-205ENST00000477508 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-205ENST00000477508 DPF2Q92785 391 aa16.19■□□□□ 0.18
TOP3A-205ENST00000477508 GNL3LQ9NVN8 582 aaKnown RBP16.19■□□□□ 0.18
TOP3A-205ENST00000477508 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
TOP3A-205ENST00000477508 SCN4AP35499 1836 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 A0A1B0GUL7 405 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 GYG1P46976 350 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 MMP14P50281 582 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 RSBN1LQ6PCB5 846 aaPredicted RBP16.18■□□□□ 0.18
TOP3A-205ENST00000477508 AGBL3Q8NEM8 1001 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
TOP3A-205ENST00000477508 KIF1BPQ96EK5 621 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 RRAGCQ9HB90 399 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 ZNF609O15014 1411 aa16.18■□□□□ 0.18
TOP3A-205ENST00000477508 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-205ENST00000477508 GMPSP49915 693 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-205ENST00000477508 TIMM10P62072 90 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
TOP3A-205ENST00000477508 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 KCNQ5Q9NR82 932 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 PSME4Q14997 1843 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
TOP3A-205ENST00000477508 H7C1D1 291 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 SEMA3EO15041 775 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 BCAMP50895 628 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 GTF2IP78347 998 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 DACT2Q5SW24 774 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 GORABQ5T7V8 394 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
TOP3A-205ENST00000477508 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 GPRC5DQ9NZD1 345 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 FAM205AQ6ZU69 1335 aa16.16■□□□□ 0.18
TOP3A-205ENST00000477508 POTECB2RU33 542 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 SCNN1DP51172 638 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 TNNI3KQ59H18 835 aa16.15■□□□□ 0.18
TOP3A-205ENST00000477508 PNMA8AQ86V59 439 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms