RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 KCTD12Q96CX2 325 aaKnown RBP8.1□□□□□ -1.11
LDB3-206ENST00000477489 EPAS1Q99814 870 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 ESYT1Q9BSJ8 1104 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 IL1RAPL2Q9NP60 686 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 CCDC87Q9NVE4 849 aa8.1□□□□□ -1.11
LDB3-206ENST00000477489 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
LDB3-206ENST00000477489 LY75O60449 1722 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 TRIM6-TRIM34B2RNG4 842 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 ATP5J2-PTCD1G3V325 749 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 EYA2O00167 538 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 CSF1RP07333 972 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 ATP5JP18859 108 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 E2F4Q16254 413 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 RC3H1Q5TC82 1133 aaKnown RBP8.09□□□□□ -1.11
LDB3-206ENST00000477489 LMBR1LQ6UX01 489 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 CLEC4GQ6UXB4 293 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 AACSQ86V21 672 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
LDB3-206ENST00000477489 SLC4A9Q96Q91 983 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 TBC1D2Q9BYX2 928 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 ZBTB3Q9H5J0 574 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 SNRKQ9NRH2 765 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 ZNF652Q9Y2D9 606 aa8.09□□□□□ -1.11
LDB3-206ENST00000477489 RTL9Q8NET4 1388 aa8.09□□□□□ -1.12
LDB3-206ENST00000477489 SCN7AQ01118 1682 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 BTAF1O14981 1849 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 SBF2Q86WG5 1849 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 COL9A1P20849 921 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 CCDC57Q2TAC2 916 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 LRRFIP1Q32MZ4 808 aaKnown RBP8.08□□□□□ -1.12
LDB3-206ENST00000477489 TNNI3KQ59H18 835 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 EPHA10Q5JZY3 1008 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
LDB3-206ENST00000477489 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 ZNF34Q8IZ26 560 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 ZBTB1Q9Y2K1 713 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 FPGT-TNNI3KV9GXZ4 949 aa8.08□□□□□ -1.12
LDB3-206ENST00000477489 A0A0G2JS52 829 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 SGSM2O43147 1006 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 PIP4K2AP48426 406 aaPredicted RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 FAM98CQ17RN3 349 aaKnown RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 INTS5Q6P9B9 1019 aaKnown RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 DDX12PQ92771 950 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 RILPL2Q969X0 211 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 EAF2Q96CJ1 260 aaPredicted RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 KIF2CQ99661 725 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 SPON1Q9HCB6 807 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 DIAPH3Q9NSV4 1193 aa8.07□□□□□ -1.12
LDB3-206ENST00000477489 PA2G4Q9UQ80 394 aaKnown RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 MYH14Q7Z406 1995 aaKnown RBP8.07□□□□□ -1.12
LDB3-206ENST00000477489 ZNF609O15014 1411 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 K7ELQ4 463 aaPredicted RBP8.06□□□□□ -1.12
LDB3-206ENST00000477489 PDE8AO60658 829 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 CRKLP46109 303 aaKnown RBP8.06□□□□□ -1.12
LDB3-206ENST00000477489 IFIT5Q13325 482 aaKnown RBP8.06□□□□□ -1.12
LDB3-206ENST00000477489 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 ZNF512BQ96KM6 892 aaPredicted RBP8.06□□□□□ -1.12
LDB3-206ENST00000477489 CAMKK2Q96RR4 588 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 NBPF3Q9H094 633 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 ARIH1Q9Y4X5 557 aaPredicted RBP8.06□□□□□ -1.12
LDB3-206ENST00000477489 COL24A1Q17RW2 1714 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 ARAP2Q8WZ64 1704 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
LDB3-206ENST00000477489 SH3TC1Q8TE82 1336 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 ANKRD18BA2A2Z9 1011 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 KCNQ2O43526 872 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 CAMTA2O94983 1202 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 HSPA4P34932 840 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 CTSWP56202 376 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 PROX2Q3B8N5 592 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 ATG9AQ7Z3C6 839 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 KCNB2Q92953 911 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 HAUS7Q99871 368 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 UTP14AQ9BVJ6 771 aaKnown RBP8.05□□□□□ -1.12
LDB3-206ENST00000477489 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 CHMP5Q9NZZ3 219 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 CEP126Q9P2H0 1117 aa8.05□□□□□ -1.12
LDB3-206ENST00000477489 DBNLQ9UJU6 430 aaKnown RBP8.05□□□□□ -1.12
LDB3-206ENST00000477489 DDX60Q8IY21 1712 aaKnown RBP8.04□□□□□ -1.12
LDB3-206ENST00000477489 GOLGA8CPA6NN73 597 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
LDB3-206ENST00000477489 PTMSP20962 102 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 TFCP2Q12800 502 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 ITPK1Q13572 414 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 TAF7LQ5H9L4 462 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 RTL5Q5HYW3 569 aaPredicted RBP8.04□□□□□ -1.12
LDB3-206ENST00000477489 TTLL11Q8NHH1 800 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 TM6SF1Q9BZW5 370 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 SIL1Q9H173 461 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 CWC22Q9HCG8 908 aaKnown RBP8.04□□□□□ -1.12
LDB3-206ENST00000477489 ANO2Q9NQ90 1003 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
LDB3-206ENST00000477489 HMG20BQ9P0W2 317 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms