RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ZNF646O15015 1829 aaPredicted RBP19.66■□□□□ 0.74
COPS3-207ENST00000477299 SMARCA5O60264 1052 aaPredicted RBP19.65■□□□□ 0.74
COPS3-207ENST00000477299 ATP2B3Q16720 1220 aa19.65■□□□□ 0.74
COPS3-207ENST00000477299 FAM84BQ96KN1 310 aaPredicted RBP19.65■□□□□ 0.74
COPS3-207ENST00000477299 EYA3Q99504 573 aa19.65■□□□□ 0.74
COPS3-207ENST00000477299 DCTPP1Q9H773 170 aa19.65■□□□□ 0.74
COPS3-207ENST00000477299 ZNF541Q9H0D2 1346 aa19.65■□□□□ 0.74
COPS3-207ENST00000477299 MED23Q9ULK4 1368 aa19.65■□□□□ 0.74
COPS3-207ENST00000477299 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
COPS3-207ENST00000477299 ECE2O60344 883 aa19.64■□□□□ 0.73
COPS3-207ENST00000477299 PUM3Q15397 648 aaKnown RBP19.64■□□□□ 0.73
COPS3-207ENST00000477299 RHPN1Q8TCX5 695 aa19.64■□□□□ 0.73
COPS3-207ENST00000477299 IL1RAPL2Q9NP60 686 aa19.64■□□□□ 0.73
COPS3-207ENST00000477299 PSME4Q14997 1843 aa19.63■□□□□ 0.73
COPS3-207ENST00000477299 FZD9O00144 591 aa19.63■□□□□ 0.73
COPS3-207ENST00000477299 YY1P25490 414 aa19.63■□□□□ 0.73
COPS3-207ENST00000477299 BCAMP50895 628 aa19.63■□□□□ 0.73
COPS3-207ENST00000477299 C15orf52Q6ZUT6 534 aaKnown RBP19.63■□□□□ 0.73
COPS3-207ENST00000477299 NIM1KQ8IY84 436 aa19.63■□□□□ 0.73
COPS3-207ENST00000477299 JDP2Q8WYK2 163 aa19.63■□□□□ 0.73
COPS3-207ENST00000477299 EAF2Q96CJ1 260 aaPredicted RBP19.63■□□□□ 0.73
COPS3-207ENST00000477299 IQSEC3Q9UPP2 1182 aaPredicted RBP19.63■□□□□ 0.73
COPS3-207ENST00000477299 A0A1B0GUL7 405 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 RAD17O75943 681 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 FBXO33Q7Z6M2 555 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 LPIN2Q92539 896 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 NEUROD6Q96NK8 337 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 CCDC8Q9H0W5 538 aaPredicted RBP19.62■□□□□ 0.73
COPS3-207ENST00000477299 VPS33BQ9H267 617 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 MYH13Q9UKX3 1938 aa19.62■□□□□ 0.73
COPS3-207ENST00000477299 ZNF609O15014 1411 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 CXCL9Q07325 125 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 HDAC1Q13547 482 aaPredicted RBP19.61■□□□□ 0.73
COPS3-207ENST00000477299 AAMPQ13685 434 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 TNNI3KQ59H18 835 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 XAGE2Q96GT9 111 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 MXD3Q9BW11 206 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 CD209Q9NNX6 404 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 TLR7Q9NYK1 1049 aaKnown RBP19.61■□□□□ 0.73
COPS3-207ENST00000477299 JAG2Q9Y219 1238 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 FPGT-TNNI3KV9GXZ4 949 aa19.61■□□□□ 0.73
COPS3-207ENST00000477299 DDNO94850 711 aaPredicted RBP19.6■□□□□ 0.73
COPS3-207ENST00000477299 SLC5A1P13866 664 aa19.6■□□□□ 0.73
COPS3-207ENST00000477299 DBNDD2Q9BQY9 259 aa19.6■□□□□ 0.73
COPS3-207ENST00000477299 G3V3G9 751 aa19.59■□□□□ 0.73
COPS3-207ENST00000477299 IFIT1P09914 478 aaKnown RBP19.59■□□□□ 0.73
COPS3-207ENST00000477299 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
COPS3-207ENST00000477299 PHKA1P46020 1223 aa19.59■□□□□ 0.73
COPS3-207ENST00000477299 DCAF8Q5TAQ9 597 aa19.59■□□□□ 0.73
COPS3-207ENST00000477299 RAB11FIP3O75154 756 aa19.58■□□□□ 0.72
COPS3-207ENST00000477299 C16orf71Q8IYS4 520 aaPredicted RBP19.58■□□□□ 0.72
COPS3-207ENST00000477299 ZNF526Q8TF50 670 aaPredicted RBP19.58■□□□□ 0.72
COPS3-207ENST00000477299 KIF1BPQ96EK5 621 aa19.58■□□□□ 0.72
COPS3-207ENST00000477299 COA1Q9GZY4 146 aa19.58■□□□□ 0.72
COPS3-207ENST00000477299 AKAP2Q9Y2D5 859 aa19.58■□□□□ 0.72
COPS3-207ENST00000477299 GJA3Q9Y6H8 435 aa19.58■□□□□ 0.72
COPS3-207ENST00000477299 AKAP11Q9UKA4 1901 aa19.58■□□□□ 0.72
COPS3-207ENST00000477299 MYO5AQ9Y4I1 1855 aaKnown RBP19.58■□□□□ 0.72
COPS3-207ENST00000477299 PSMD14O00487 310 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 IL1R1P14778 569 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 HSP90AB4PQ58FF6 505 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 ZNF804AQ7Z570 1209 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 AACSQ86V21 672 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 ERC1Q8IUD2 1116 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 TDRD7Q8NHU6 1098 aaKnown RBP19.57■□□□□ 0.72
COPS3-207ENST00000477299 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
COPS3-207ENST00000477299 GPR108Q9NPR9 543 aa19.57■□□□□ 0.72
COPS3-207ENST00000477299 DBNLQ9UJU6 430 aaKnown RBP19.57■□□□□ 0.72
COPS3-207ENST00000477299 ZBTB12Q9Y330 459 aaPredicted RBP19.57■□□□□ 0.72
COPS3-207ENST00000477299 SHTN1A0MZ66 631 aa19.56■□□□□ 0.72
COPS3-207ENST00000477299 EIF6P56537 245 aaKnown RBP19.56■□□□□ 0.72
COPS3-207ENST00000477299 GTF2IP78347 998 aa19.56■□□□□ 0.72
COPS3-207ENST00000477299 CCDC102BQ68D86 513 aa19.56■□□□□ 0.72
COPS3-207ENST00000477299 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
COPS3-207ENST00000477299 PODNQ7Z5L7 613 aa19.56■□□□□ 0.72
COPS3-207ENST00000477299 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
COPS3-207ENST00000477299 COL1A1P02452 1464 aaPredicted RBP19.55■□□□□ 0.72
COPS3-207ENST00000477299 NEFLP07196 543 aa19.55■□□□□ 0.72
COPS3-207ENST00000477299 CIAPIN1Q6FI81 312 aa19.55■□□□□ 0.72
COPS3-207ENST00000477299 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
COPS3-207ENST00000477299 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 POTECB2RU33 542 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 SCARF1Q14162 830 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 GRIK5Q16478 980 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 CAVIN4Q5BKX8 364 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 VPS37DQ86XT2 251 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
COPS3-207ENST00000477299 OTUD7AQ8TE49 926 aaPredicted RBP19.54■□□□□ 0.72
COPS3-207ENST00000477299 CHAF1AQ13111 956 aaPredicted RBP19.53■□□□□ 0.72
COPS3-207ENST00000477299 DACT2Q5SW24 774 aa19.53■□□□□ 0.72
COPS3-207ENST00000477299 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
COPS3-207ENST00000477299 PI16Q6UXB8 463 aa19.53■□□□□ 0.72
COPS3-207ENST00000477299 CERS5Q8N5B7 392 aa19.53■□□□□ 0.72
COPS3-207ENST00000477299 USP17L3A6NCW0 530 aa19.52■□□□□ 0.72
COPS3-207ENST00000477299 USP17L4A6NCW7 530 aa19.52■□□□□ 0.72
COPS3-207ENST00000477299 VIL1P09327 827 aaKnown RBP19.52■□□□□ 0.72
COPS3-207ENST00000477299 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
COPS3-207ENST00000477299 USP17L1Q7RTZ2 530 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms