RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DDX12PQ92771 950 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 SBNO2Q9Y2G9 1366 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 CCDC6Q16204 474 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 JDP2Q8WYK2 163 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 ZBTB21Q9ULJ3 1066 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 PSMC4P43686 418 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 AKNAD1Q5T1N1 836 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 TCEANC2Q96MN5 208 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 ZC3H12CQ9C0D7 883 aaKnown RBP21.11■□□□□ 0.97
VARS2-209ENST00000477288 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
VARS2-209ENST00000477288 SPDYE3A6NKU9 549 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 B4DLN1 442 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 MRPL12P52815 198 aaKnown RBP21.1■□□□□ 0.97
VARS2-209ENST00000477288 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
VARS2-209ENST00000477288 SIRT1Q96EB6 747 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 RASAL2Q9UJF2 1139 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 SELENOOQ9BVL4 669 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 BMP15O95972 392 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 KIF4AO95239 1232 aa21.1■□□□□ 0.97
VARS2-209ENST00000477288 CYLC1P35663 651 aaPredicted RBP21.1■□□□□ 0.97
VARS2-209ENST00000477288 CCDC50Q8IVM0 306 aa21.09■□□□□ 0.97
VARS2-209ENST00000477288 UBE2HP62256 183 aa21.09■□□□□ 0.97
VARS2-209ENST00000477288 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
VARS2-209ENST00000477288 TTC12Q9H892 705 aaPredicted RBP21.09■□□□□ 0.97
VARS2-209ENST00000477288 DISP3Q9P2K9 1392 aa21.09■□□□□ 0.97
VARS2-209ENST00000477288 PTPRKQ15262 1439 aa21.09■□□□□ 0.97
VARS2-209ENST00000477288 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
VARS2-209ENST00000477288 RRP36Q96EU6 259 aaKnown RBP21.09■□□□□ 0.97
VARS2-209ENST00000477288 NSFL1CQ9UNZ2 370 aaKnown RBP21.08■□□□□ 0.97
VARS2-209ENST00000477288 TAF12Q16514 161 aa21.08■□□□□ 0.97
VARS2-209ENST00000477288 BMP2KLQ5H9B9 411 aa21.08■□□□□ 0.97
VARS2-209ENST00000477288 Q6ZUG5 572 aa21.08■□□□□ 0.97
VARS2-209ENST00000477288 RTCBQ9Y3I0 505 aaKnown RBP21.08■□□□□ 0.97
VARS2-209ENST00000477288 SP4Q02446 784 aa21.08■□□□□ 0.96
VARS2-209ENST00000477288 BIN2Q9UBW5 565 aaPredicted RBP21.08■□□□□ 0.96
VARS2-209ENST00000477288 FAM13AO94988 1023 aa21.08■□□□□ 0.96
VARS2-209ENST00000477288 MARCKSP29966 332 aaPredicted RBP21.08■□□□□ 0.96
VARS2-209ENST00000477288 UGGT2Q9NYU1 1516 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 TNNI2P48788 182 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 PLCB3Q01970 1234 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 RBM8AQ9Y5S9 174 aaKnown RBP21.07■□□□□ 0.96
VARS2-209ENST00000477288 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
VARS2-209ENST00000477288 TPTE2Q6XPS3 522 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 NSRP1Q9H0G5 558 aaKnown RBP21.07■□□□□ 0.96
VARS2-209ENST00000477288 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 PODXL2Q9NZ53 605 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 NPHP3Q7Z494 1330 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 GRM8O00222 908 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 IL15P40933 162 aaPredicted RBP21.07■□□□□ 0.96
VARS2-209ENST00000477288 CCDC160A6NGH7 325 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 HSPA4P34932 840 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 MIGA1Q8NAN2 632 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 TIGD1Q96MW7 591 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 MEIS3Q99687 375 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 ZNF830Q96NB3 372 aaPredicted RBP21.07■□□□□ 0.96
VARS2-209ENST00000477288 CTAGE1Q96RT6 745 aa21.07■□□□□ 0.96
VARS2-209ENST00000477288 HCLS1P14317 486 aaPredicted RBP21.06■□□□□ 0.96
VARS2-209ENST00000477288 JAG2Q9Y219 1238 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 NBPF14Q5TI25 921 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 TNRQ92752 1358 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 ZSCAN22P10073 491 aaPredicted RBP21.06■□□□□ 0.96
VARS2-209ENST00000477288 SELENOSQ9BQE4 189 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 CTAGE15A4D2H0 777 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 CTAGE8P0CG41 777 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 CTAGE6Q86UF2 777 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 CTAGE4Q8IX94 777 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 CABLES1Q8TDN4 633 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 ZBTB9Q96C00 473 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 DHX58Q96C10 678 aa21.06■□□□□ 0.96
VARS2-209ENST00000477288 LMOD1P29536 600 aaPredicted RBP21.05■□□□□ 0.96
VARS2-209ENST00000477288 CFAP57Q96MR6 1250 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 ANO6Q4KMQ2 910 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 HELBQ8NG08 1087 aaPredicted RBP21.05■□□□□ 0.96
VARS2-209ENST00000477288 KCNG4Q8TDN1 519 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 PSMA7O14818 248 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 CCDC77Q9BR77 488 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 SMIM23A6NLE4 172 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 MAGEB6Q8N7X4 407 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 PAG1Q9NWQ8 432 aa21.05■□□□□ 0.96
VARS2-209ENST00000477288 ZWINTO95229 277 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 CNPY2Q9Y2B0 182 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 TMX3Q96JJ7 454 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 ANKRD36BQ8N2N9 1353 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 ZBTB16Q05516 673 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 SDSP20132 328 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 ZSCAN23Q3MJ62 389 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 KRT79Q5XKE5 535 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 ATRIPQ8WXE1 791 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 DNAI1Q9UI46 699 aa21.04■□□□□ 0.96
VARS2-209ENST00000477288 MAP7D1Q3KQU3 841 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 RTL9Q8NET4 1388 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 SH3BP5O60239 455 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 IL2RBP14784 551 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 MNAT1P51948 309 aa21.03■□□□□ 0.96
VARS2-209ENST00000477288 PA2G4Q9UQ80 394 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms